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Large effects and the infinitesimal model.

Todd L Parsons1, Peter L Ralph2

  • 1LPSM, Sorbonne Université, CNRS UMR 8001, Paris, 75005, France.

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Summary
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Quantitative genetics models assume similar genetic effect sizes, but this study finds large effects are important. Non-Gaussian models are needed when genetic effect sizes vary significantly.

Keywords:
Animal modelEvolutionary dynamicsInfinitesimal modelQuantitative genetics

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Area of Science:

  • Quantitative genetics
  • Population genetics
  • Statistical genetics

Background:

  • The infinitesimal model assumes many loci with similar effect sizes for quantitative traits.
  • This model relies on the Central Limit Theorem, predicting Normal distributions for trait variations.

Purpose of the Study:

  • Investigate the impact of non-similar genetic effect sizes on quantitative genetics models.
  • Explore alternative statistical distributions when effect sizes vary.

Main Methods:

  • Analyzed tail exponents of effect size distributions from genome-wide association studies (GWAS).
  • Applied a different Central Limit Theorem for non-Gaussian distributions.
  • Investigated implications for trait evolution models.

Main Results:

  • Empirical tail exponents for human disease traits fall between 1 and 2.
  • This suggests stable distributions, where large effects remain significant.
  • Independence of offspring trait deviations implies Gaussianity only under specific conditions.

Conclusions:

  • The assumption of similar effect sizes is critical for the Gaussian nature of the infinitesimal model.
  • Non-Gaussian models are necessary when genetic effect sizes have heavy tails.
  • Tracking large-effect loci is crucial for understanding trait evolution with non-Gaussian genetics.