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Cancer neoepitopes viewed through negative selection and peripheral tolerance: a new path to cancer vaccines
Abstract:
A proportion of somatic mutations in tumors create neoepitopes that can prime T cell responses that target the MHC I-neoepitope complexes on tumor cells, mediating tumor control or rejection. Despite the compelling centrality of neoepitopes to cancer immunity, we know remarkably little about what constitutes a neoepitope that can mediate tumor control in vivo and what distinguishes such a neoepitope from the vast majority of similar candidate neoepitopes that are inefficacious in vivo. Studies in mice as well as clinical trials have begun to reveal the unexpected paradoxes in this area. Because cancer neoepitopes straddle that ambiguous ground between self and non-self, some rules that are fundamental to immunology of frankly non-self antigens, such as viral or model antigens, do not appear to apply to neoepitopes. Because neoepitopes are so similar to self-epitopes, with only small changes that render them non-self, immune response to them is regulated at least partially the way immune response to self is regulated. Therefore, neoepitopes are viewed and understood here through the clarifying lens of negative thymic selection. Here, the emergent questions in the biology and clinical applications of neoepitopes are discussed critically and a mechanistic and testable framework that explains the complexity and translational potential of these wonderful antigens is proposed.
Insights
Neoepitopes, arising from tumor mutations, can trigger T cell responses for cancer immunity. Understanding which neoepitopes effectively control tumors remains a challenge, necessitating a new framework for their study.
Area of Science:
- Immunology
- Oncology
- Cancer Research
Background:
- Somatic mutations in tumors generate neoepitopes, which are targets for T cell-mediated tumor immunity.
- The precise characteristics of efficacious neoepitopes that mediate in vivo tumor control are not well understood.
- Neoepitopes present unique challenges due to their similarity to self-epitopes, complicating immune response regulation.
Purpose of the Study:
- To critically discuss emergent questions in neoepitope biology and clinical applications.
- To propose a mechanistic and testable framework for understanding neoepitope complexity and translational potential.
Main Methods:
- Review and critical discussion of existing studies in mice and clinical trials.
- Analysis of neoepitope recognition through the lens of negative thymic selection.
- Development of a conceptual framework for neoepitope research.
Main Results:
- Neoepitopes exhibit unique immunological properties distinct from non-self antigens.
- Immune responses to neoepitopes are regulated, in part, similarly to self-antigens.
- A framework is proposed to address the complexity and translational potential of neoantigens.
Conclusions:
- Further research is needed to elucidate the rules governing effective neoepitope recognition and T cell activation.
- Understanding neoepitope regulation is crucial for developing effective cancer immunotherapies.
- The proposed framework aims to guide future investigations into neoepitope-based cancer treatments.
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