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Updated: Jul 10, 2026

Co-analysis of Brain Structure and Function using fMRI and Diffusion-weighted Imaging
Published on: November 8, 2012
Assessment of Precision and Accuracy of Brain White Matter Microstructure using Combined Diffusion MRI and
Santiago Coelho1,2, Ying Liao1,2, Filip Szczepankiewicz3
1Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Grossman School of Medicine, New York, NY, USA.
Abstract:
Joint modeling of diffusion and relaxation has seen growing interest due to its potential to provide complementary information about tissue microstructure. For brain white matter, we designed an optimal diffusion-relaxometry MRI protocol that samples multiple b-values, B-tensor shapes, and echo times (TE). This variable-TE protocol (27 min) has as subsets a fixed-TE protocol (15 min) and a 2-shell dMRI protocol (7 min), both characterizing diffusion only. We assessed the sensitivity, specificity and reproducibility of these protocols with synthetic experiments and in six healthy volunteers. Compared with the fixed-TE protocol, the variable-TE protocol enables estimation of free water fractions while also capturing compartmental relaxation times. Jointly measuring diffusion and relaxation offers increased sensitivity and specificity to microstructure parameters in brain white matter with voxelwise coefficients of variation below 10%.
Insights
This study introduces an optimized MRI protocol for brain white matter, combining diffusion and relaxation measurements. This advanced method enhances sensitivity and specificity for analyzing tissue microstructure.
Area of Science:
- Magnetic Resonance Imaging (MRI)
- Biophysics
- Neuroimaging
Background:
- Joint modeling of diffusion and relaxation in MRI offers complementary insights into tissue microstructure.
- Characterizing brain white matter requires advanced imaging protocols to capture complex microstructural details.
Purpose of the Study:
- To design and validate an optimal diffusion-relaxometry Magnetic Resonance Imaging (MRI) protocol for brain white matter.
- To evaluate the sensitivity, specificity, and reproducibility of the proposed protocol compared to existing methods.
Main Methods:
- Developed a variable-echo time (TE) diffusion-relaxometry MRI protocol with multiple b-values and B-tensor shapes.
- Assessed protocol performance using synthetic data and in vivo scans of six healthy volunteers.
- Compared the variable-TE protocol with fixed-TE and diffusion MRI (dMRI) only protocols.
Main Results:
- The variable-TE protocol (27 min) includes subsets for fixed-TE (15 min) and dMRI (7 min) analysis.
- It enables estimation of free water fractions and captures compartmental relaxation times.
- Achieved voxelwise coefficients of variation below 10% for microstructure parameters.
Conclusions:
- Joint diffusion-relaxation MRI provides a more comprehensive characterization of brain white matter microstructure.
- The optimized variable-TE protocol offers a versatile tool for advanced neuroimaging research.
- This approach holds potential for improved diagnostic capabilities in neurological conditions affecting white matter.

