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Updated: Jul 1, 2025

Efficient Production and Identification of CRISPR/Cas9-generated Gene Knockouts in the Model System Danio rerio
Published on: August 28, 2018
Current Strategies for Increasing Knock-In Efficiency in CRISPR/Cas9-Based Approaches
Andrés Felipe Leal1,2, Angelica María Herreno-Pachón1,3, Eliana Benincore-Flórez1
1Nemours Children's Health, Wilmington, DE 19803, USA.
CRISPR/Cas9 gene therapy offers precise editing, overcoming classical gene therapy risks. Enhancing homologous recombination (HDR) over non-homologous end-joining (NHEJ) is key for successful CRISPR gene therapy applications.
Area of Science:
- Biotechnology
- Genetics
- Molecular Biology
Background:
- Classical gene therapy (GT) uses lentivirus (LV) or adeno-associated virus (AAV) for transgene delivery, risking severe side effects due to random genome integration.
- CRISPR/Cas9 gene editing enables precise transgene insertion via homologous direct repair (HDR), a process often limited by cellular mechanisms favoring non-homologous end-joining (NHEJ).
Purpose of the Study:
- To review current strategies for enhancing HDR efficiency in CRISPR/Cas9-based gene therapy.
- To highlight the advantages of CRISPR/Cas9 genome editing over classical GT approaches.
Main Methods:
- Comprehensive literature review of existing methods to improve HDR efficiency.
- Analysis of CRISPR/Cas9 system mechanisms and cellular repair pathways (HDR vs. NHEJ).
Main Results:
- Classical GT methods (LV, AAV) have demonstrated severe adverse events in clinical trials.
- CRISPR/Cas9 requires efficient HDR for precise gene insertion, but NHEJ often predominates.
- Various approaches are being explored to boost HDR efficiency for safer and more effective gene therapy.
Conclusions:
- Improving HDR efficiency is critical for advancing CRISPR/Cas9-based gene therapy.
- CRISPR/Cas9 holds significant promise for precise gene therapy, provided HDR can be effectively harnessed.
- Further research into HDR enhancement is essential for overcoming current gene therapy challenges.
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