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Updated: Jul 1, 2025

Engineering Antiviral Agents via Surface Plasmon Resonance
Published on: June 14, 2022
Developing inhibitory peptides against SARS-CoV-2 envelope protein
Ramsey Bekdash1,2,3, Kazushige Yoshida1,2, Manoj S Nair4
1Department of Rehabilitation and Regenerative Medicine, Columbia University, New York, New York, United States of America.
Abstract:
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has affected approximately 800 million people since the start of the Coronavirus Disease 2019 (COVID-19) pandemic. Because of the high rate of mutagenesis in SARS-CoV-2, it is difficult to develop a sustainable approach for prevention and treatment. The Envelope (E) protein is highly conserved among human coronaviruses. Previous studies reported that SARS-CoV-1 E deficiency reduced viral propagation, suggesting that E inhibition might be an effective therapeutic strategy for SARS-CoV-2. Here, we report inhibitory peptides against SARS-CoV-2 E protein named iPep-SARS2-E. Leveraging E-induced alterations in proton homeostasis and NFAT/AP-1 pathway in mammalian cells, we developed screening platforms to design and optimize the peptides that bind and inhibit E protein. Using Vero-E6 cells, human-induced pluripotent stem cell-derived branching lung organoid and mouse models with SARS-CoV-2, we found that iPep-SARS2-E significantly inhibits virus egress and reduces viral cytotoxicity and propagation in vitro and in vivo. Furthermore, the peptide can be customizable for E protein of other human coronaviruses such as Middle East Respiratory Syndrome Coronavirus (MERS-CoV). The results indicate that E protein can be a potential therapeutic target for human coronaviruses.
Insights
Researchers developed novel peptides, iPep-SARS2-E, targeting the conserved SARS-CoV-2 Envelope protein. These peptides effectively inhibit viral propagation and cytotoxicity in vitro and in vivo, offering a potential therapeutic strategy for coronaviruses.
Area of Science:
- Virology
- Drug Discovery
- Molecular Biology
Background:
- The COVID-19 pandemic, caused by SARS-CoV-2, poses a significant global health challenge.
- High mutation rates in SARS-CoV-2 complicate prevention and treatment strategies.
- The conserved Envelope (E) protein across human coronaviruses presents a potential therapeutic target.
Purpose of the Study:
- To develop and characterize novel inhibitory peptides targeting the SARS-CoV-2 Envelope (E) protein.
- To evaluate the therapeutic potential of these peptides against SARS-CoV-2 infection.
- To explore the adaptability of these peptides for other human coronaviruses.
Main Methods:
- Development of screening platforms based on E protein-induced alterations in proton homeostasis and NFAT/AP-1 pathways.
- Design and optimization of inhibitory peptides (iPep-SARS2-E) against SARS-CoV-2 E protein.
- In vitro and in vivo testing using cell cultures (Vero-E6), lung organoids, and mouse models.
Main Results:
- iPep-SARS2-E significantly inhibits SARS-CoV-2 virus egress.
- The peptide reduces viral cytotoxicity and propagation in both in vitro and in vivo models.
- The developed peptide strategy is customizable for other human coronaviruses, including MERS-CoV.
Conclusions:
- The SARS-CoV-2 Envelope (E) protein is a viable therapeutic target for developing antiviral strategies.
- iPep-SARS2-E demonstrates significant potential for inhibiting SARS-CoV-2 and related coronaviruses.
- Targeting the conserved E protein offers a promising avenue for broad-spectrum coronavirus therapeutics.
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