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Updated: Jun 30, 2025

Generation of High Quality Chromatin Immunoprecipitation DNA Template for High-throughput Sequencing ChIP-seq
Published on: April 19, 2013
The IFIH1-A946T risk variant promotes diabetes in a sex-dependent manner
Amanda J Stock1, Pierina Gonzalez Paredes1, Luciana Previato de Almeida1
1Oklahoma Medical Research Foundation, Arthritis & Clinical Immunology, Oklahoma City, OK, United States.
Abstract:
Type 1 diabetes (T1D) is an autoimmune disease in which pancreatic islet β-cells are attacked by the immune system, resulting in insulin deficiency and hyperglycemia. One of the top non-synonymous single-nucleotide polymorphisms (SNP) associated with T1D is in the interferon-induced helicase C domain-containing protein 1 (IFIH1), which encodes an anti-viral cytosolic RNA sensor. This SNP results in an alanine to threonine substitution at amino acid 946 (IFIH1) and confers an increased risk for several autoimmune diseases, including T1D. We hypothesized that the IFIH1 risk variant, (IFIH1) would promote T1D pathogenesis by stimulating type I interferon (IFN I) signaling leading to immune cell alterations. To test this, we developed Ifih1 knock-in mice on the non-obese diabetic (NOD) mouse background, a spontaneous T1D model. Our results revealed a modest increase in diabetes incidence and insulitis in Ifih1 compared to non-risk Ifih1 (Ifih1 mice and a significant acceleration of diabetes onset in Ifih1 females. Ifih1 mice exhibited a significantly enhanced interferon stimulated gene (ISG) signature compared to Ifih1, indicative of increased IFN I signaling. Ifih1 mice exhibited an increased frequency of plasma cells as well as tissue-dependent changes in the frequency and activation of CD8+ T cells. Our results indicate that IFIH1 may contribute to T1D pathogenesis by altering the frequency and activation of immune cells. These findings advance our knowledge on the connection between the rs1990760 variant and T1D. Further, these data are the first to demonstrate effects of Ifih1 in NOD mice, which will be important to consider for the development of therapeutics for T1D.
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