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Published on: August 9, 2024
FLUTE: A Python GUI for interactive phasor analysis of FLIM data
Dale Gottlieb1, Bahar Asadipour1, Polina Kostina1
1Laboratory for Optics and Biosciences, École Polytechnique, CNRS, INSERM, Institut Polytechnique de Paris, 91128 Palaiseau, France.
We developed Fluorescence Lifetime Ultimate Explorer (FLUTE), a Python GUI for phasor analysis of fluorescence lifetime imaging microscopy (FLIM) data. FLUTE simplifies and automates FLIM analysis, making it accessible for non-specialized labs.
Area of Science:
- Biophotonics and imaging science
- Computational biology and bioinformatics
Background:
- Fluorescence lifetime imaging microscopy (FLIM) provides insights into fluorophore microenvironments.
- The fit-free phasor approach simplifies FLIM data interpretation.
- A lack of open-source Python GUIs hinders widespread adoption of phasor analysis for FLIM data.
Purpose of the Study:
- To introduce Fluorescence Lifetime Ultimate Explorer (FLUTE), an open-source Python GUI for phasor analysis of FLIM data.
- To address the need for user-friendly tools in FLIM data analysis.
- To facilitate broader application of phasor analysis in biomedical research.
Main Methods:
- Development of a Python-based graphical user interface (GUI) named FLUTE.
- Implementation of automated FLIM data calibration and interactive phasor plot exploration.
- Integration of simultaneous display of phasor plots and FLIM images with lifetime contrasts.
- Inclusion of functionality for calculating distances to known molecular species and data export.
Main Results:
- FLUTE provides a user-friendly platform for phasor analysis of time-domain FLIM data.
- The GUI simplifies complex FLIM data processing, including calibration and filtering.
- Tested with diverse datasets, including zebrafish embryos and in vitro cells, demonstrating robustness.
- Facilitates interactive visualization and analysis of large FLIM datasets.
Conclusions:
- FLUTE democratizes advanced FLIM phasor analysis for researchers without specialized expertise.
- The tool accelerates FLIM data analysis through automation and interactive visualization.
- FLUTE enhances the accessibility and utility of phasor-based FLIM analysis in biomedical research.
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