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Updated: Jun 30, 2025

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Sedimentation Equilibrium of a Small Oligomer-forming Membrane Protein: Effect of Histidine Protonation on Pentameric Stability
Published on: April 2, 2015
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Histidine Protonation States Regulate the State Transition from R State Hemoglobin
Haruka Yotsuya1, Miho Tanaka1, Yukichi Kitamura2
1Graduate School of Informatics, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan.
The Journal of Physical Chemistry. B
|March 15, 2024
Summary
Lowering pH protonates hemoglobin histidines, shifting its structure and oxygen affinity. This study reveals how protonation influences hemoglobin
Area of Science:
- Biochemistry
- Molecular Biology
- Biophysics
Background:
- The Bohr effect describes hemoglobin's O2 affinity modulation by pH.
- Hemoglobin structural transitions are crucial for oxygen transport.
- Protonation of specific histidine residues influences these transitions.
Purpose of the Study:
- To investigate pH-induced structural changes in hemoglobin.
- To elucidate the role of histidine protonation states (PSs) in hemoglobin's R and R2 states.
- To understand the molecular mechanisms underlying the Bohr effect.
Main Methods:
- Molecular dynamics (MD) simulations were employed.
- Simulations explored hemoglobin transitions between R and R2 states.
- Investigated effects of varying pH (7.0, 6.5, 5.5) on histidine residue protonation.
Main Results:
- Protonated histidine residues promote R to R2 state transition.
- Increased distance between β1-β2 subunits observed due to weakened inter-subunit interactions.
- Protonation effects align with experimental observations of R2 state crystallization at low pH.
Conclusions:
- Protonation of βHis143 and βHis146 is key to pH-dependent hemoglobin structural changes.
- The interplay between protonation states and R state stability governs the Bohr effect.
- Findings provide molecular insights into hemoglobin's physiological oxygen transport regulation.
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