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Genetic features of patients with MPS type IIIB: Description of five pathogenic gene variations
Mahzad Nasir Shalal1, Majid Aminzadeh2, Alihossein Saberi3
1Diabetes Research Center, Health Research Institute, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran; Department of Medical Genetics, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran.
Background:
There are four distinct forms of Sanfilippo syndrome (MPS type III), each of which is an autosomal lysosomal storage disorder. These forms are caused by abnormalities in one of four lysosomal enzymes. This study aimed to identify possible genetic variants that contribute to Sanfilippo IIIB in 14 independent families in Southwest Iran.
Methods:
Patients were included if their clinical features and enzyme assay results were suggestive. The patients were subsequently subjected to Sanger Sequencing to screen for Sanfilippo-related genes. Additional investigations have been conducted using various computational analyses to determine the probable functional effects of diagnosed variants.
Results:
Five distinct variations were identified in the NAGLU gene. This included two novel variants in two distinct families and three previously reported variants in 12 distinct families. All of these variations were recognized as pathogenic using the MutationTaster web server. In silico analysis showed that all detected variants affected protein structural stability; four destabilized protein structures, and the fifth variation had the opposite effect.
Conclusion:
In this study, two novel variations in the NAGLU gene were identified. The results of this study positively contribute to the mutation diversity of the NAGLU gene. To identify new disease biomarkers and therapeutic targets, precision medicine must precisely characterize and account for genetic variations. New harmful gene variants are valuable for updating gene databases concerning Sanfilippo disease variations and NGS gene panels. This may also improve genetic counselling for rapid risk examinations and disease surveillance.
Insights
Researchers identified two new harmful gene variations in the NAGLU gene, contributing to Sanfilippo IIIB. This discovery aids in updating Sanfilippo disease databases and improving genetic counseling for affected families.
Area of Science:
- Genetics
- Biochemistry
- Medical Science
Background:
- Sanfilippo syndrome (MPS type III) comprises four autosomal lysosomal storage disorders.
- Each form results from defects in specific lysosomal enzymes.
- This research focuses on Sanfilippo IIIB, a subtype of MPS type III.
Purpose of the Study:
- To identify genetic variants contributing to Sanfilippo IIIB.
- To investigate 14 families from Southwest Iran with suspected Sanfilippo IIIB.
- To expand the understanding of genetic mutations in Sanfilippo IIIB.
Main Methods:
- Patient selection based on clinical and enzyme assay data.
- Sanger sequencing of Sanfilippo-related genes.
- Computational analyses to assess the functional impact of identified variants.
Main Results:
- Five distinct variations were found in the NAGLU gene.
- Two novel and three previously reported pathogenic variants were identified.
- In silico analysis indicated that variants affected protein structural stability.
Conclusions:
- Two novel NAGLU gene variations were identified in Sanfilippo IIIB patients.
- Findings contribute to the known mutation diversity of the NAGLU gene.
- Accurate characterization of genetic variations is crucial for precision medicine, biomarker discovery, and improved genetic counseling.
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