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Updated: Jun 30, 2025

Purification of Pathogen Vacuoles from Legionella-infected Phagocytes
Published on: June 19, 2012
Legionella metaeffector MavL reverses ubiquitin ADP-ribosylation via a conserved arginine-specific macrodomain
Zhengrui Zhang1, Jiaqi Fu2, Johannes Gregor Matthias Rack3,4
1Department of Chemistry, Purdue University, West Lafayette, IN, 47907, USA.
Abstract:
ADP-ribosylation is a reversible post-translational modification involved in various cellular activities. Removal of ADP-ribosylation requires (ADP-ribosyl)hydrolases, with macrodomain enzymes being a major family in this category. The pathogen Legionella pneumophila mediates atypical ubiquitination of host targets using the SidE effector family in a process that involves ubiquitin ADP-ribosylation on arginine 42 as an obligatory step. Here, we show that the Legionella macrodomain effector MavL regulates this pathway by reversing the arginine ADP-ribosylation, likely to minimize potential detrimental effects caused by the modified ubiquitin. We determine the crystal structure of ADP-ribose-bound MavL, providing structural insights into recognition of the ADP-ribosyl group and catalytic mechanism of its removal. Further analyses reveal DUF4804 as a class of MavL-like macrodomain enzymes whose representative members show unique selectivity for mono-ADP-ribosylated arginine residue in synthetic substrates. We find such enzymes are also present in eukaryotes, as exemplified by two previously uncharacterized (ADP-ribosyl)hydrolases in Drosophila melanogaster. Crystal structures of several proteins in this class provide insights into arginine specificity and a shared mode of ADP-ribose interaction distinct from previously characterized macrodomains. Collectively, our study reveals a new regulatory layer of SidE-catalyzed ubiquitination and expands the current understanding of macrodomain enzymes.
Insights
Legionella effector MavL reverses ubiquitin ADP-ribosylation, regulating pathogen-induced ubiquitination. This study reveals novel macrodomain enzymes, including eukaryotic ones, involved in ADP-ribosylation and de-ADP-ribosylation processes.
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- ADP-ribosylation is a reversible post-translational modification crucial for cellular functions.
- Macrodomain enzymes are key players in removing ADP-ribosylation marks.
- Legionella pneumophila utilizes the SidE effector family for atypical ubiquitination, involving arginine ADP-ribosylation.
Purpose of the Study:
- To investigate the role of Legionella macrodomain effector MavL in regulating SidE-mediated ubiquitination.
- To elucidate the structural basis of MavL's ADP-ribosylhydrolase activity.
- To identify and characterize novel macrodomain enzymes with similar functions.
Main Methods:
- Crystal structure determination of ADP-ribose-bound MavL.
- Biochemical assays to assess enzymatic activity and substrate specificity.
- Structural analysis of DUF4804 family proteins and eukaryotic homologs.
Main Results:
- MavL reverses arginine ADP-ribosylation on ubiquitin, acting as a (ADP-ribosyl)hydrolase.
- The crystal structure of MavL reveals its mechanism for recognizing and removing ADP-ribose.
- DUF4804 proteins, including eukaryotic homologs from Drosophila melanogaster, represent a new class of macrodomain enzymes with arginine specificity.
Conclusions:
- MavL provides a regulatory mechanism for SidE-catalyzed ubiquitination, preventing potential detrimental effects.
- The study expands the known repertoire of macrodomain enzymes and their functions in de-ADP-ribosylation.
- Structural insights into MavL and DUF4804 enzymes offer a deeper understanding of ADP-ribosylation regulation.
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