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Improving Generalizability of PET DL Algorithms: List-Mode Reconstructions Improve DOTATATE PET Hepatic Lesion
Xinyi Yang1, Michael Silosky2, Jonathan Wehrend3
1Department of Biostatistics and Informatics, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA.
Reconstructing modern PET/CT scanner data using list-mode reconstructions can improve deep learning (DL) performance for detecting gastroenteropancreatic neuroendocrine tumors (GEP-NETs). This method enhances DL algorithm generalizability by matching noise levels between datasets, reducing annotation costs.
Area of Science:
- Medical Imaging
- Artificial Intelligence
- Oncology
Background:
- Deep learning (DL) for DOTATATE PET lesion detection requires large, annotated datasets, which are scarce due to low incidence of gastroenteropancreatic neuroendocrine tumors (GEP-NETs) and high annotation costs.
- DL models often lack generalizability, performing poorly on data from different PET/CT scanners or protocols, necessitating larger, more diverse training sets.
Purpose of the Study:
- To investigate the feasibility of enhancing DL algorithm performance by aligning background noise characteristics between training and out-of-domain testing datasets.
- To evaluate the impact of list-mode reconstructions on improving DL model generalizability for GEP-NET detection.
Main Methods:
- Acquired 68Ga-DOTATATE PET/CT datasets from a modern digital scanner (Scanner1) and an older analog scanner (Scanner2).
- Reconstructed Scanner1 data using standard parameters and list-mode reconstructions at varying durations (2-5 min). Scanner2 data used standard iterative reconstruction.
- Trained DL networks on data from each scanner and tested Network1 (Scanner1) on out-of-domain Scanner2 data, evaluating performance with varying training data fractions.
Main Results:
- List-mode reconstructed data from Scanner1 (2-min) showed noise levels most similar to Scanner2 data, yielding the best DL performance (F1 = 0.713), comparable to in-domain training (F1 = 0.755).
- Increasing training data from 25% to 100% significantly improved DL model performance (F1 from 0.478 to 0.713; p < 0.001).
- List-mode reconstructions enable modern PET data to mimic noise properties of older scanners, improving DL generalizability.
Conclusions:
- Reconstructing modern PET/CT data with list-mode protocols can effectively match the noise characteristics of older scanners, enhancing DL algorithm performance.
- Utilizing existing annotated data with list-mode reconstructions reduces dataset generation costs and effort, significantly improving DL model generalizability for GEP-NET detection.
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