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Updated: Jun 29, 2025

Characterizing RNA Modifications in Single Neurons Using Mass Spectrometry
Published on: April 21, 2022
Emerging function of main RNA methylation modifications in the immune microenvironment of digestive system tumors
Yifan Zeng1, Tao Yu1, Zhuoqi Lou1
1State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, National Medical Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310003, China.
Abstract:
Digestive system tumors have been reported in more than 25% of all cancer cases worldwide, bringing a huge burden on the healthcare system. RNA methylation modification-an important post-transcriptional modification-has become an active research area in gene regulation. It is a dynamic and reversible process involving several enzymes, such as methyltransferases, demethylases, and methylation reader proteins. This review provides insights into the role of three major methylation modifications, namely m6A, m5C, and m1A, in the development of digestive system tumors, specifically in the development of tumor immune microenvironment (TIME) of these malignancies. Abnormal methylation modification affects immunosuppression and antitumor immune response by regulating the recruitment of immune cells and the release of immune factors. Understanding the mechanisms by which RNA methylation regulates digestive system tumors will be helpful in exploring new therapeutic targets.
Insights
RNA methylation, including m6A, m5C, and m1A, significantly impacts digestive system tumors and the tumor immune microenvironment (TIME). Understanding these modifications offers potential new therapeutic targets for cancer treatment.
Area of Science:
- Oncology
- Epigenetics
- Immunology
Background:
- Digestive system tumors represent over 25% of global cancer cases, posing a significant healthcare challenge.
- RNA methylation, a key post-transcriptional modification, is crucial for gene regulation and has emerged as a vital research area.
- This modification is a dynamic, reversible process involving specific enzymes like methyltransferases, demethylases, and reader proteins.
Purpose of the Study:
- To review the role of three major RNA methylation modifications (m6A, m5C, m1A) in digestive system tumor development.
- To elucidate the impact of these modifications on the tumor immune microenvironment (TIME) of digestive system malignancies.
- To highlight the potential of targeting RNA methylation mechanisms for novel therapeutic strategies.
Main Methods:
- Literature review focusing on RNA methylation modifications (m6A, m5C, m1A).
- Analysis of the role of these modifications in the development and progression of digestive system tumors.
- Investigation of the influence of RNA methylation on the tumor immune microenvironment (TIME).
Main Results:
- Abnormal RNA methylation patterns are implicated in the pathogenesis of digestive system tumors.
- These modifications critically affect immunosuppression and antitumor immune responses.
- Dysregulated methylation influences immune cell recruitment and the release of immune factors within the TIME.
Conclusions:
- RNA methylation modifications (m6A, m5C, m1A) play a significant role in the development of digestive system tumors.
- These epigenetic changes impact the tumor immune microenvironment (TIME), influencing immune evasion and response.
- Targeting RNA methylation pathways presents a promising avenue for developing innovative cancer therapies.
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Types of RNA
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...

