WormBase 2024: status and transitioning to Alliance infrastructure
Paul W Sternberg1, Kimberly Van Auken1, Qinghua Wang1
1Division of Biology and Biological Engineering 140-18, California Institute of Technology, Pasadena, CA 91125, USA.
Genetics
|April 4, 2024
Summary
WormBase, a key resource for Caenorhabditis elegans genetics, is moving to the Alliance of Genome Resources. This ensures continued C. elegans research support and data integration.
Area of Science:
- Genomics
- Nematode Biology
- Bioinformatics
Background:
- WormBase has served as a primary knowledgebase for Caenorhabditis elegans and related nematode research for over 20 years.
- The rapid pace of C. elegans research necessitates continuous updates and improved data integration.
Purpose of the Study:
- To outline the current status of WormBase.
- To detail the transition of WormBase's core infrastructure to the Alliance of Genome Resources (the Alliance).
- To ensure the long-term sustainability and continued relevance of the WormBase resource.
Main Methods:
- Discussion of WormBase's current infrastructure and data curation processes.
- Planning and execution of the migration of WormBase to the Alliance of Genome Resources.
- Continued community interaction and feature development.
Main Results:
- WormBase is actively transitioning its core infrastructure to the Alliance of Genome Resources.
- The Alliance membership will facilitate better integration with other genomic resources.
- WormBase will maintain its role in curating C. elegans research and community engagement.
Conclusions:
- The move to the Alliance ensures WormBase's sustainability and enhances its integration capabilities.
- WormBase will continue to support C. elegans research through ongoing curation and new feature development.
- The Alliance partnership strengthens the global genomic resource landscape.
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