Related Experiment Video
Updated: May 5, 2026

Determination of Fatty Acid Oxidation and Lipogenesis in Mouse Primary Hepatocytes
Published on: August 27, 2015
Comparison of transcriptomic profiles between HFPO-DA and prototypical PPARα, PPARγ, and cytotoxic agents in
Melissa M Heintz1, William D Klaren1, Alexander W East1
1ToxStrategies LLC, Asheville, North Carolina 28801, USA.
Abstract:
Recent in vitro transcriptomic analyses for the short-chain polyfluoroalkyl substance, HFPO-DA (ammonium, 2,3,3,3-tetrafluoro-2-(heptafluoropropoxy)-propanoate), support conclusions from in vivo data that HFPO-DA-mediated liver effects in mice are part of the early key events of the peroxisome proliferator-activated receptor alpha (PPARα) activator-induced rodent hepatocarcinogenesis mode of action (MOA). Transcriptomic responses in HFPO-DA-treated rodent hepatocytes have high concordance with those treated with a PPARα agonist and lack concordance with those treated with PPARγ agonists or cytotoxic agents. To elucidate whether HFPO-DA-mediated transcriptomic responses in mouse liver are PPARα-dependent, additional transcriptomic analyses were conducted on samples from primary PPARα knockout (KO) and wild-type (WT) mouse hepatocytes exposed for 12, 24, or 72 h with various concentrations of HFPO-DA, or well-established agonists of PPARα (GW7647) and PPARγ (rosiglitazone), or cytotoxic agents (acetaminophen or d-galactosamine). Pathway and predicted upstream regulator-level responses were highly concordant between HFPO-DA and GW7647 in WT hepatocytes. A similar pattern was observed in PPARα KO hepatocytes, albeit with a distinct temporal and concentration-dependent delay potentially mediated by compensatory responses. This delay was not observed in PPARα KO hepatocytes exposed to rosiglitazone, acetaminophen, d-galactosamine. The similarity in transcriptomic signaling between HFPO-DA and GW7647 in both the presence and absence of PPARα in vitro indicates these compounds share a common MOA.
Insights
HFPO-DA exposure in mouse liver cells mirrors the effects of PPARα activators, suggesting a shared mechanism in rodent liver cancer. This was confirmed using PPARα knockout models, indicating a common mode of action.
Area of Science:
- Toxicology
- Molecular Biology
- Hepatocarcinogenesis
Background:
- HFPO-DA is a short-chain PFAS linked to liver effects in mice.
- In vivo data suggests HFPO-DA's liver effects align with PPARα activator MOA.
- Transcriptomic data shows HFPO-DA responses mimic PPARα agonists, not PPARγ agonists or cytotoxins.
Purpose of the Study:
- To determine if HFPO-DA's transcriptomic effects in mouse liver are PPARα-dependent.
- To compare HFPO-DA's molecular signaling with known PPARα and PPARγ agonists.
- To investigate the role of PPARα in HFPO-DA's mode of action.
Main Methods:
- In vitro transcriptomic analysis of primary mouse hepatocytes (WT and PPARα KO).
- Exposure to HFPO-DA, PPARα agonist (GW7647), PPARγ agonist (rosiglitazone), and cytotoxins (acetaminophen, d-galactosamine).
- Analysis of transcriptomic responses at 12, 24, and 72 hours.
Main Results:
- HFPO-DA and GW7647 showed highly concordant transcriptomic responses in WT hepatocytes.
- Similar concordance was observed in PPARα KO hepatocytes, but with a delayed response.
- The delay in PPARα KO cells was specific to HFPO-DA and GW7647, not other tested agents.
Conclusions:
- HFPO-DA and PPARα activators share a common mode of action in rodent hepatocarcinogenesis.
- PPARα plays a key role in mediating HFPO-DA's transcriptomic effects.
- Compensatory mechanisms may influence the temporal response in the absence of PPARα.
Related Concept Videos
Cell Specific Gene Expression
Transducer Mechanism: Nuclear Receptors
About 48 different soluble family members of nuclear receptors are identified that can be divided into two main classes:

