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Updated: Jun 29, 2025

Performing an In Vitro Genome-Wide CRISPR Knockout Screen in Chimeric Antigen Receptor T Cells
Published on: January 31, 2025
Functional CRISPR screens in T cells reveal new opportunities for cancer immunotherapies
Minghua Xiang1,2, Huayi Li1,2, Yuanyuan Zhan3
1Department of Obstetrics and Gynecology, National Clinical Research Center for Obstetrics and Gynecology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Abstract:
T cells are fundamental components in tumour immunity and cancer immunotherapies, which have made immense strides and revolutionized cancer treatment paradigm. However, recent studies delineate the predicament of T cell dysregulation in tumour microenvironment and the compromised efficacy of cancer immunotherapies. CRISPR screens enable unbiased interrogation of gene function in T cells and have revealed functional determinators, genetic regulatory networks, and intercellular interactions in T cell life cycle, thereby providing opportunities to revamp cancer immunotherapies. In this review, we briefly described the central roles of T cells in successful cancer immunotherapies, comprehensively summarised the studies of CRISPR screens in T cells, elaborated resultant master genes that control T cell activation, proliferation, fate determination, effector function, and exhaustion, and highlighted genes (BATF, PRDM1, and TOX) and signalling cascades (JAK-STAT and NF-κB pathways) that extensively engage in multiple branches of T cell responses. In conclusion, this review bridged the gap between discovering element genes to a specific process of T cell activities and apprehending these genes in the global T cell life cycle, deepened the understanding of T cell biology in tumour immunity, and outlined CRISPR screens resources that might facilitate the development and implementation of cancer immunotherapies in the clinic.
Insights
CRISPR screens reveal key genes controlling T cell function, offering new strategies to improve cancer immunotherapies by understanding T cell biology in the tumor microenvironment.
Area of Science:
- Immunology
- Genetics
- Oncology
Background:
- T cells are crucial for cancer immunity and immunotherapy effectiveness.
- T cell dysfunction in the tumor microenvironment limits current cancer treatments.
- CRISPR screens offer a powerful tool to study T cell biology.
Purpose of the Study:
- To review the role of T cells in cancer immunotherapy.
- To summarize CRISPR screen findings in T cells.
- To identify master genes and pathways regulating T cell responses.
Main Methods:
- Comprehensive review of existing literature on T cells and CRISPR screens.
- Analysis of CRISPR screen data to identify key genes and pathways.
- Focus on genes controlling T cell activation, proliferation, fate, function, and exhaustion.
Main Results:
- CRISPR screens have identified critical genes and regulatory networks in T cells.
- Master regulators like BATF, PRDM1, and TOX, and pathways like JAK-STAT and NF-κB are highlighted.
- These elements significantly influence multiple T cell responses.
Conclusions:
- This review connects gene discovery to T cell processes and the overall T cell life cycle.
- It deepens the understanding of T cell biology in tumor immunity.
- CRISPR screen insights can advance cancer immunotherapy development and clinical application.
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