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Protein Dynamics in Living Cells01:19

Protein Dynamics in Living Cells

2.1K
Different fluorescence-based techniques are used to study the protein dynamics in living cells. These techniques include FRAP, FRET, and PET.
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
2.1K
Super-resolution Fluorescence Microscopy01:37

Super-resolution Fluorescence Microscopy

7.0K
Super-resolution fluorescence microscopy (SRFM) provides a better resolution than conventional fluorescence microscopy by reducing the point spread function (PSF). PSF is the light intensity distribution from a point that causes it to appear blurred. Due to PSF, each fluorescing point appears bigger than its actual size, and it is the PSF interference of nearby fluorophores that causes the blurred image. Various approaches to achieving higher resolution through SRFM have recently been...
7.0K
Total Internal Reflection Fluorescence Microscopy01:05

Total Internal Reflection Fluorescence Microscopy

5.7K
Total internal reflection fluorescence microscopy or TIRF is an advanced microscopic technique used to visualize fluorophores in samples close to a solid surface with a higher refractive index, such as a glass coverslip. TIRF only allows fluorophores in proximity to the solid surface to be excited. When light from a medium with a lower refractive index (such as air) hits the glass coverslip at a critical angle, the light undergoes total internal reflection stead of passing through the glass.
5.7K
Fluorescence and Phosphorescence: Instrumentation01:25

Fluorescence and Phosphorescence: Instrumentation

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Fluorometers and spectrofluorometers are two types of instruments used for measuring molecular fluorescence. These instruments differ in how they select excitation and emission wavelengths and the type of light sources they utilize. Fluorometers use absorption interference filters to choose excitation and emission wavelengths. The excitation source in a fluorometer is typically a low-pressure mercury vapor lamp that emits intense lines distributed throughout the ultraviolet and visible regions.
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Related Experiment Video

Updated: Jun 29, 2025

High Precision FRET at Single-molecule Level for Biomolecule Structure Determination
11:24

High Precision FRET at Single-molecule Level for Biomolecule Structure Determination

Published on: May 13, 2017

10.7K

A practical guide to time-resolved fluorescence microscopy and spectroscopy.

Benjamin S Clark, Irene Silvernail, Kenya Gordon

    Biorxiv : the Preprint Server for Biology
    |April 8, 2024
    PubMed
    Summary
    This summary is machine-generated.

    This guide calibrates time-correlated single photon counting (TCSPC) methods, including fluorescence correlation spectroscopy (FCS) and pulsed interleaved excitation-Förster resonance energy transfer (PIE-FRET), for biomolecular dynamics analysis. Reliable calibration ensures accurate diffusion and proximity measurements in biological samples.

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    Fluorescence Lifetime Imaging of Molecular Rotors in Living Cells
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    Time-Resolved Fluorescence Anisotropy from Single Molecules for Characterizing Local Flexibility in Biomolecules

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    Related Experiment Videos

    Last Updated: Jun 29, 2025

    High Precision FRET at Single-molecule Level for Biomolecule Structure Determination
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    Time-Resolved Fluorescence Anisotropy from Single Molecules for Characterizing Local Flexibility in Biomolecules
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    Area of Science:

    • Biophysics
    • Molecular Dynamics
    • Confocal Microscopy

    Background:

    • Time-correlated single photon counting (TCSPC) is crucial for real-time biomolecular dynamics monitoring.
    • Confocal microscopy combined with TCSPC allows simultaneous data collection for advanced analyses.

    Conclusions:

    • Combining TCSPC-based FCS and PIE-FRET offers a powerful approach for analyzing biomolecular dynamics.
    • Accurate calibration is essential for obtaining reliable biophysical data.
    • This methodology aids in revealing mechanistic details of biological processes.