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Updated: Jun 28, 2025

Visualization of Bacterial Resistance using Fluorescent Antibiotic Probes
Published on: March 2, 2020
Pyrrole-based inhibitors of RND-type efflux pumps reverse antibiotic resistance and display anti-virulence potential
Nisha Mahey1,2, Rushikesh Tambat1, Ritu Kalia3
1Clinical Microbiology & Antimicrobial Research Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India.
Abstract:
Efflux pumps of the resistance-nodulation-cell division (RND) superfamily, particularly the AcrAB-TolC, and MexAB-OprM, besides mediating intrinsic and acquired resistance, also intervene in bacterial pathogenicity. Inhibitors of such pumps could restore the activities of antibiotics and curb bacterial virulence. Here, we identify pyrrole-based compounds that boost antibiotic activity in Escherichia coli and Pseudomonas aeruginosa by inhibiting their archetype RND transporters. Molecular docking and biophysical studies revealed that the EPIs bind to AcrB. The identified efflux pump inhibitors (EPIs) inhibit the efflux of fluorescent probes, attenuate persister formation, extend post-antibiotic effect, and diminish resistant mutant development. The bacterial membranes remained intact upon exposure to the EPIs. EPIs also possess an anti-pathogenic potential and attenuate P. aeruginosa virulence in vivo. The intracellular invasion of E. coli and P. aeruginosa inside the macrophages was hampered upon treatment with the lead EPI. The excellent efficacy of the EPI-antibiotic combination was evidenced in animal lung infection and sepsis protection models. These findings indicate that EPIs discovered herein with negligible toxicity are potential antibiotic adjuvants to address life-threatening Gram-negative bacterial infections.
Insights
New pyrrole-based compounds inhibit bacterial efflux pumps, restoring antibiotic effectiveness and reducing virulence in Gram-negative infections like E. coli and P. aeruginosa. These compounds show potential as safe antibiotic adjuvants.
Area of Science:
- Microbiology
- Pharmacology
- Biochemistry
Background:
- Resistance-nodulation-cell division (RND) superfamily efflux pumps, such as AcrAB-TolC and MexAB-OprM, are crucial for bacterial intrinsic and acquired resistance.
- These efflux pumps also play a significant role in the pathogenicity of Gram-negative bacteria.
Purpose of the Study:
- To identify novel pyrrole-based compounds that inhibit RND efflux pumps.
- To evaluate the potential of these inhibitors as antibiotic adjuvants to combat Gram-negative bacterial infections and virulence.
Main Methods:
- Molecular docking and biophysical studies to determine inhibitor-target interactions.
- Assays to assess efflux pump inhibition, antibiotic potentiation, and effects on bacterial physiology (persister formation, post-antibiotic effect).
- In vitro and in vivo studies evaluating anti-virulence and therapeutic efficacy in infection models.
Main Results:
- Pyrrole-based compounds were identified as inhibitors of RND transporters, binding to AcrB.
- These efflux pump inhibitors (EPIs) successfully inhibited probe efflux, reduced persister formation, extended post-antibiotic effect, and decreased resistant mutant development.
- EPIs demonstrated anti-pathogenic potential, attenuated P. aeruginosa virulence in vivo, and inhibited intracellular invasion of bacteria into macrophages.
- Combination therapy with EPIs and antibiotics showed significant efficacy in animal models of lung infection and sepsis, with negligible toxicity.
Conclusions:
- Novel pyrrole-based efflux pump inhibitors (EPIs) effectively target RND transporters in E. coli and P. aeruginosa.
- EPIs potentiate antibiotic activity, reduce bacterial virulence, and prevent resistance development without compromising bacterial membrane integrity.
- These EPIs represent promising antibiotic adjuvants for treating severe Gram-negative bacterial infections.
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