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Updated: Jun 28, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Microbiota and Immunity during Respiratory Infections: Lung and Gut Affair
Veronica Marrella1,2, Federico Nicchiotti3, Barbara Cassani2,3
1UOS Milan Unit, Istituto di Ricerca Genetica e Biomedica (IRGB), CNR, 20138 Milan, Italy.
Respiratory infections alter the lung microbiome, increasing disease severity. Gut-lung communication influences inflammation and immunity, suggesting new microbial therapies for lung health.
Area of Science:
- Microbiology
- Immunology
- Pulmonology
Background:
- Respiratory tract infections cause significant global morbidity and mortality.
- The lung microbiome's role in pulmonary diseases is increasingly recognized, with gut dysbiosis linked to lung conditions.
- Mechanisms of lung microbiome impact on the gut remain unclear, but gut-lung axis communication is crucial.
Purpose of the Study:
- To review lung microbiome alterations during respiratory infections.
- To explore the consequences of these changes on host-pathogen interactions and inflammation.
- To highlight the bidirectional gut-lung communication's role in immunity and disease.
Main Methods:
- Review of existing animal and human studies on lung and gut microbiota in respiratory infections.
- Analysis of microbiome modifications, host-pathogen interactions, and inflammatory responses.
- Discussion of current and emerging therapeutic strategies.
Main Results:
- Respiratory infections reduce lung microbial diversity and increase microbial load.
- Altered lung microbiota affects inflammatory signals and cytokine production, impacting disease outcomes.
- The gut-lung axis plays a significant role in modulating inflammation and immunity.
Conclusions:
- Understanding lung microbiome dynamics and gut-lung communication is vital for respiratory health.
- Microbial-based therapies (probiotics, supplements) and targeted treatments (phages, antibodies) show promise.
- Future research should address key questions for translational applications in preventing and controlling respiratory infections.
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