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scMoresDB: A comprehensive database of single-cell multi-omics data for human respiratory system
Kang Chen1, Yutong Han1, Yanni Wang1
1Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou 510080, Guangdong Province, China.
Iscience
|April 15, 2024
Summary
scMoresDB is a new database for single-cell multi-omics data in human respiratory diseases. It addresses data sharing and analysis challenges, improving accessibility for researchers studying lung conditions.
Area of Science:
- Pulmonary Medicine
- Bioinformatics
- Genomics
Background:
- The human respiratory system is susceptible to numerous diseases.
- Single-cell sequencing provides high-resolution molecular and phenotypic data for respiratory disease research.
- Increasing single-cell data volume presents significant challenges for sharing and analysis.
Purpose of the Study:
- To introduce scMoresDB, a novel database platform for single-cell multi-omics data.
- To facilitate comprehensive data sharing and integrative analysis of respiratory disease datasets.
- To enhance the accessibility and utility of single-cell data for respiratory research.
Main Methods:
- Development of a user-friendly database platform, scMoresDB.
- Re-analysis of single-cell multi-omics datasets.
- Implementation of cross-omics search, interactive visualizations, and analytical tools.
Main Results:
- scMoresDB offers extensive omics types tailored for human respiratory diseases.
- The platform enables user-friendly data exploration and analysis.
- Example applications identified the BSG receptor's role in SARS-CoV-2 infection and HHIP/TGFB2 in COPD.
Conclusions:
- scMoresDB significantly improves the accessibility and utility of single-cell data for human respiratory diseases.
- The platform supports advanced data sharing and integrative analysis.
- Findings highlight potential therapeutic targets and disease mechanisms in respiratory conditions.
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