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An LSTM-based adversarial variational autoencoder framework for self-supervised neural decoding of behavioral

Shiva Salsabilian1, Christian Lee2, David Margolis2

  • 1Integrated Systems and NeuroImaging Laboratory, Department of Electrical and Computer Engineering, Rutgers University, Piscataway, NJ 08854, United States of America.

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|April 15, 2024
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Summary

This study introduces a novel framework for unsupervised behavioral analysis and subject-invariant neural decoding. The approach achieves 89.7% accuracy in cross-subject neural decoding, enhancing the link between neural activity and behavior.

Keywords:
LSTMadversarial variational autoencoderbehaviorneural decodingself-supervised learningsubject variability

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Area of Science:

  • Neuroscience
  • Machine Learning
  • Computational Biology

Background:

  • Linking neural data and behavior is challenging due to difficulties in unsupervised behavioral analysis and subject-specific neural variations.
  • Developing generalized neural decoding models requires extracting subject-invariant features.

Purpose of the Study:

  • To present data-driven solutions for unsupervised behavioral data analysis and automatic label generation.
  • To extract subject-invariant features for generalized neural decoding models.
  • To improve cross-subject transfer learning in neural decoding.

Main Methods:

  • An unsupervised autoencoder method for behavioral data transformation and cluster-friendly feature space generation.
  • Iterative refinement of clusters using soft clustering assignment loss for improved feature representations.
  • Adversarial learning with a long short-term memory-based adversarial variational autoencoder (LSTM-AVAE) to capture shared neural information across subjects.

Main Results:

  • The proposed model achieved 89.7% accuracy in cross-subject neural decoding on mouse cortical recordings.
  • The adversarial network effectively eliminated subject dependency in neural representations, improving transfer learning.
  • LSTM-AVAE demonstrated effectiveness in capturing temporal dependencies within neural data.

Conclusions:

  • The framework is effective for unsupervised clustering and label generation of behavioral data.
  • High accuracy in cross-subject neural decoding indicates the model's potential for relating neural activity to behavior.
  • The approach offers a robust solution for generalized neural decoding and understanding neural-behavior relationships.