Polygenic scores for cardiovascular risk factors improve estimation of clinical outcomes in CCB treatment compared to pharmacogenetic variants alone
Related Experiment Video
Updated: Jun 28, 2025

In Silico Clinical Trials for Cardiovascular Disease
Published on: May 27, 2022
Deniz Türkmen1, Jack Bowden2,3, Jane A H Masoli1,4
1Epidemiology & Public Health Group, Department of Clinical & Biomedical Science, Faculty of Health & Life Sciences, University of Exeter, Exeter, UK.
Insights
Genetic risk factors modify how patients respond to Calcium Channel Blockers (CCBs). Combining pharmacogenetic variants with polygenic scores for fat mass and lipoprotein A improves prediction of treatment discontinuation and heart failure risk.
Area of Science:
- Cardiovascular Pharmacology
- Genetics
- Precision Medicine
Background:
- Pharmacogenetic variants influence clinical outcomes in Calcium Channel Blocker (CCB) therapy.
- The impact of genetically predicted clinical risk factors on these pharmacogenetic effects remains unclear.
Purpose of the Study:
- To investigate whether genetically predicted clinical risk factors modify the association between pharmacogenetic variants and CCB treatment outcomes.
- To assess the combined predictive value of pharmacogenetic variants and polygenic risk scores for treatment discontinuation and heart failure.
Main Methods:
- Analysis of 32,000 UK Biobank participants treated with dihydropyridine CCBs.
- Inclusion of 23 pharmacogenetic variants and calculation of polygenic scores for blood pressure, body fat mass, and other traits.
- Evaluation of treatment discontinuation and heart failure as primary outcomes.
Main Results:
- The NUMA1 variant (rs10898815-A) was associated with increased CCB treatment discontinuation, particularly in individuals with high polygenic scores for fat mass.
- The RYR3 variant (rs877087 T-allele) independently increased heart failure risk, with substantially elevated risks observed in patients with high polygenic scores for fat mass, lean mass, and lipoprotein A.
Conclusions:
- Genetically predicted risk factors, such as adiposity and lipoprotein A levels, significantly modify the impact of specific pharmacogenetic variants on CCB treatment outcomes.
- Integrating polygenic scores with pharmacogenetic data may enhance the accuracy of risk prediction for treatment discontinuation and heart failure in CCB users.
Abstract:
Pharmacogenetic variants are associated with clinical outcomes during Calcium Channel Blocker (CCB) treatment, yet whether the effects are modified by genetically predicted clinical risk factors is unknown. We analyzed 32,000 UK Biobank participants treated with dihydropiridine CCBs (mean 5.9 years), including 23 pharmacogenetic variants, and calculated polygenic scores for systolic and diastolic blood pressures, body fat mass, and other patient characteristics. Outcomes included treatment discontinuation and heart failure. Pharmacogenetic variant rs10898815-A (NUMA1) increased discontinuation rates, highest in those with high polygenic scores for fat mass. The RYR3 variant rs877087 T-allele alone modestly increased heart failure risks versus non-carriers (HR:1.13, p = 0.02); in patients with high polygenic scores for fat mass, lean mass, and lipoprotein A, risks were substantially elevated (HR:1.55, p = 4 × 10-5). Incorporating polygenic scores for adiposity and lipoprotein A may improve risk estimates of key clinical outcomes in CCB treatment such as treatment discontinuation and heart failure, compared to pharmacogenetic variants alone.
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