Efficient parameter inference in networked dynamical systems via steady states: A surrogate objective function
Yanna Ding1, Jianxi Gao1, Malik Magdon-Ismail1
1Department of Computer Science, Rensselaer Polytechnic Institute, Troy, New York 12180, USA.
This study introduces a new method to estimate parameters in networked dynamical systems using only noisy steady-state data. The approach significantly reduces computational cost and improves prediction accuracy for future equilibria.
Area of Science:
- Networked dynamical systems
- Computational biology
- Systems ecology
Background:
- Parameter inference is vital for predicting nodal dynamics in networked systems.
- Traditional methods often require time-series data, which is not always available.
- Noisy steady-state data presents a challenge for parameter estimation.
Purpose of the Study:
- To develop an efficient method for inferring dynamical parameters from noisy steady-state data.
- To reduce the computational complexity associated with traditional parameter estimation techniques.
- To improve the accuracy of predicting future equilibria in networked systems.
Main Methods:
- Introduced a surrogate objective function using decoupled equations to compute steady states.
- Optimized the surrogate objective function to approximate ground truth steady states.
- Reduced computational demand by avoiding repeated simulations of coupled ordinary differential equations.
Main Results:
- Achieved more accurate steady-state approximations compared to noisy observations.
- Successfully predicted future equilibria following network topology changes.
- Demonstrated effectiveness across ecological, gene regulatory, and epidemic network models.
Conclusions:
- The proposed method offers an efficient and effective approach for parameter estimation from steady-state data.
- This technique has the potential to enhance predictions in various networked dynamical systems.
- Enables robust parameter inference even with limited or noisy observational data.
Related Concept Videos
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
Linear Approximation in Time Domain
For a simple pendulum with a mass evenly distributed along its length and the center of mass located at half the pendulum's length,...
Linear Approximation in Frequency Domain
In contrast, nonlinear systems do not inherently possess these properties. However, for small deviations around an operating point, a nonlinear system can often be approximated as linear....
One-Compartment Open Model: Wagner-Nelson and Loo Riegelman Method for ka Estimation
On...
Model Approaches for Pharmacokinetic Data: Distributed Parameter Models
The distributed parameter models are specifically designed to account for variations and differences in some drug classes. This model is particularly useful for assessing regional concentrations of anticancer or...
Mechanistic Models: Compartment Models in Individual and Population Analysis


