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Related Concept Videos

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Transposons make up a significant part of genomes of various organisms. Therefore, it is believed that transposition played a major evolutionary role in speciation by changing genome sizes and modifying gene expression patterns. For example, in bacteria, transposition can lead to conferring antibiotic resistance. Movement of transposable elements within the genetic pool of pathogenic bacteria can aid in transfer of antibiotic-resistant genetic elements. In eukaryotes, transposons can carry out...
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As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
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LTR retrotransposons are class I transposable elements with long terminal repeats flanking an internal coding region. These elements are less abundant in mammals compared to other class I transposable elements. About 8 percent of human genomic DNA comprises LTR retrotransposons. Some of the common examples of LTR retrotransposons are Ty elements in yeast and Copia elements in Drosophila.
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Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
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DNA-only transposons are called autonomous transposons since they code for the enzyme transposase that is required for the transposition mechanism. Insertion of transposons can alter gene functions in multiple ways. They can mutate the gene, alter gene expression by introducing a novel promoter or insulator sequence, introduce new splice sites, and change the mRNA transcripts produced, or remodel chromatin structure.
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Updated: Jun 28, 2025

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Transposable elements regulate thymus development and function.

Jean-David Larouche1,2, Céline M Laumont3,4, Assya Trofimov1,5,6,7

  • 1Institute for Research in Immunology and Cancer, Université de Montréal, Montreal, Canada.

Elife
|April 18, 2024
PubMed
Summary
This summary is machine-generated.

Transposable elements (TEs) are active in the thymus, influencing T-cell development. Orchestrating TE expression in thymic cells is crucial for preventing autoimmunity.

Keywords:
central tolerancegeneticsgenomicshumanimmunologyinflammationmouseplasmacytoid dendritic cellsthymic epithelial cellsthymustransposable elements

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Area of Science:

  • Genomics
  • Immunology
  • Molecular Biology

Background:

  • Transposable elements (TEs) constitute a significant portion of mammalian genomes.
  • TEs are highly expressed in medullary thymic epithelial cells (mTECs), crucial for T-cell development.

Purpose of the Study:

  • To investigate the role of TEs in T-cell development within the thymus.
  • To elucidate the multiomic interactions of TEs in human and mouse thymic cells.

Main Methods:

  • Multiomic analyses (transcriptomics, immunopeptidomics) of TEs in human and mouse thymic cells.
  • Analysis of TE expression patterns across different cell lineages and ages.

Main Results:

  • TE expression in the human thymus varies with age and cell lineage.
  • mTECs and plasmacytoid dendritic cells (pDCs) exhibit broad TE repertoires.
  • TEs in mTECs interact with key transcription factors and generate peptides for thymocyte education.
  • TE-derived dsRNA in pDCs may activate innate immunity, explaining IFN-α/β secretion.

Conclusions:

  • TEs interact extensively with the adaptive immune system in the thymus.
  • Orchestrating TE expression in thymic cells (mTECs, pDCs) is vital for establishing central T-cell tolerance and preventing autoimmunity.