Related Experiment Video
Updated: Jun 28, 2025

05:44
Isolation of Proximal Fluids to Investigate the Tumor Microenvironment of Pancreatic Adenocarcinoma
Published on: November 5, 2020
4.3K
A Predictive Noninvasive Single-Nucleotide Variation-Based Biomarker Signature for Resectable Pancreatic Cancer:
Nico Seeger1, Stefan Gutknecht2, Irin Zschokke3
1Department of Visceral and Thoracic Surgery, Cantonal Hospital of Winterthur, Winterthur, Switzerland.
JMIR Research Protocols
|April 18, 2024
Summary
This prospective study validates single-nucleotide variations (SNVs) as biomarkers for pancreatic cancer survival. Identifying these genetic markers aims to personalize treatment and improve outcomes for patients with pancreatic ductal adenocarcinoma (PDAC).
Area of Science:
- Oncology
- Genetics
- Biomarker Discovery
Background:
- Single-nucleotide variations (SNVs) show promise as noninvasive biomarkers for predicting patient outcomes in pancreatic ductal adenocarcinoma (PDAC).
- Previous retrospective analyses identified three SNVs in CD44 and CHI3L2 genes associated with increased risk of tumor-related death in PDAC patients.
- Retrospective study limitations necessitate prospective validation for clinical application in guiding PDAC therapy.
Purpose of the Study:
- To prospectively validate the association of identified SNVs with survival in patients with PDAC undergoing pancreatic resection.
- To overcome limitations of retrospective study designs and facilitate clinical translation of SNV biomarkers.
- To assess the utility of SNVs in selecting patients who may benefit most from pancreatic resection.
Main Methods:
- Prospective cohort study including consecutive patients with PDAC undergoing pancreatic resection at three Swiss hospitals.
- SNV genotyping performed on patient blood samples using standard techniques.
- Log-rank and Cox multivariate regression analyses conducted, adjusting for AJCC stage and resection status; 3-year minimum follow-up.
Main Results:
- The study is ongoing, with data collection estimated to conclude in May 2027.
- As of November 2023, 142 out of a required 150 patients have been recruited.
- Genotyping and data analysis are pending completion of patient recruitment; results are anticipated in 2027.
Conclusions:
- This is the first prospective study to validate the CD44 and CHI3L2 SNV-based biomarker signature in PDAC.
- Prospective validation could enable clinical use of this signature as a noninvasive, readily available predictive biomarker for survival post-resection.
- The findings may aid in individualizing treatment decisions and improving patient outcomes for PDAC.

