Related Experiment Video
Updated: Jun 28, 2025

Isolation and Analysis of Microbial Communities in Soil, Rhizosphere, and Roots in Perennial Grass Experiments
Published on: July 24, 2018
Nitrogen-fixing bacterial communities differ between perennial agroecosystem crops
Kira Sorochkina1,2, Willm Martens-Habbena3, Catherine L Reardon4
1Department of Soil, Water, and Ecosystem Sciences, University of Florida, Gainesville, FL, United States.
Agricultural management impacts soil biocrusts, altering microbial communities. While nitrogen fixation rates are similar to natural ecosystems, vineyard and citrus orchard biocrusts show distinct compositions influenced by farming practices.
Area of Science:
- Microbial ecology
- Soil science
- Agricultural science
Background:
- Biocrusts are microbial communities on soil surfaces, crucial in natural ecosystems.
- Agroecosystem biocrusts exhibit nitrogen fixation but their community composition under agricultural management is understudied.
Purpose of the Study:
- To investigate how agricultural management influences the bacterial and diazotrophic communities of biocrusts.
- To compare biocrusts from citrus orchards, vineyards, and apple orchards differing in management, climate, and soil type.
Main Methods:
- Examined total bacterial and diazotrophic communities in biocrusts from diverse agricultural settings.
- Compared microbial composition across different management systems (citrus, vineyard, apple orchard).
Main Results:
- Agroecosystem biocrusts were dominated by proteobacteria, unlike natural biocrusts, with lower cyanobacteria abundance.
- Diazotroph communities in all studied agroecosystems were dominated by Nostocales cyanobacteria, similar to natural biocrusts.
- Vineyard and citrus orchard biocrust composition was linked to irrigation and fertilizer inputs, while apple orchard biocrusts varied with soil and climate.
Conclusions:
- Agricultural management, alongside climatic and edaphic factors, significantly shapes soil biocrust community composition and function.
- Seasonality did not appear to affect the bacterial and diazotrophic communities in these agroecosystem biocrusts.
More Related Videos
20:01Single-plant, Sterile Microcosms for Nodulation and Growth of the Legume Plant Medicago truncatula with the Rhizobial Symbiont Sinorhizobium meliloti
Published on: October 1, 2013
09:04Monitoring Bacterial Colonization and Maintenance on Arabidopsis thaliana Roots in a Floating Hydroponic System
Published on: May 28, 2019
Related Concept Videos
The Roles of Bacteria and Fungi in Plant Nutrition
Overview of Nitrogen Metabolism
The largest pool of nitrogen available in the terrestrial ecosystem is gaseous nitrogen (N2) from the air, but this...
The Nitrogen Cycle
Overview of Metabolism
Plant Metabolism
Sunlight, the primary source of energy in plants, is first absorbed by the chlorophyll pigments present in their leaves. Plants then use this energy to carry out photosynthesis, where water is oxidized into oxygen and carbon dioxide...
Bioremediation
Key Elements for Plant Nutrition