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Intralumenal Vesicles and Multivesicular Bodies01:38

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Intraluminal vesicles (ILVs) are small vesicles 50-80 nm in diameter formed during the maturation of early endosomes. A specialized endosome containing numerous ILVs is called a multivesicular body (MVB). ILVs contain internalized molecules such as antigens, nucleic acids, proteins, and metabolites. Some of these molecules are released from the MVBs inside exosomes and are transported to other cells. Other MVBs contain molecules that are retained in the ILVs and are later degraded within the...
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Updated: Jun 28, 2025

Direct Stochastic Optical Reconstruction Microscopy of Extracellular Vesicles in Three Dimensions
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Single Extracellular Vesicle Imaging and Computational Analysis Identifies Inherent Architectural Heterogeneity.

Kshipra S Kapoor1,2, Seoyun Kong1, Hikaru Sugimoto1

  • 1Department of Cancer Biology and Metastasis Research Center, The University of Texas MD Anderson Cancer Center, Houston, Texas 77054, United States.

ACS Nano
|April 23, 2024
PubMed
Summary
This summary is machine-generated.

Extracellular vesicles (EVs) show consistent architectural heterogeneity across various sources, revealed by cryo-transmission electron microscopy (cryo-TEM). This structural atlas offers insights into EV function and biodistribution.

Keywords:
architectural heterogeneitycryo-EMextracellular vesicle purificationextracellular vesiclesmachine learning

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Area of Science:

  • Biophysics
  • Cell Biology
  • Nanotechnology

Background:

  • Extracellular vesicles (EVs) play critical roles in intercellular communication.
  • Understanding EV heterogeneity is essential for their therapeutic and diagnostic applications.
  • Current methods often lack the resolution to capture native EV architecture.

Purpose of the Study:

  • To characterize the architectural heterogeneity of extracellular vesicles (EVs).
  • To establish a structural atlas of EVs using high-resolution imaging.
  • To investigate if EV architecture is consistent across different cell sources and isolation methods.

Main Methods:

  • Cryogenic transmission electron microscopy (cryo-TEM) for high-resolution imaging of native EVs.
  • Isolation of EVs from diverse sources including cancer cells, normal cells, immortalized cells, and body fluids.
  • A computational pipeline utilizing a segmentation neural network model for quantifying EV architecture.

Main Results:

  • Consistent architectural heterogeneity was observed across 7,576 imaged EVs.
  • EV shapes predominantly comprised single spherical, rod-like/tubular, and double configurations.
  • This heterogeneity was independent of EV source and purification techniques.
  • Average eccentricity was 0.5366 ± 0.2, and average equivalent diameter was 132.43 ± 67 nm.

Conclusions:

  • EVs exhibit a conserved set of architectural shapes regardless of origin or isolation method.
  • Cryo-TEM provides a powerful tool for unbiased structural analysis of EVs.
  • This structural atlas serves as a foundational reference for EV research and understanding their biological impact.