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Masked autoencoders with generalizable self-distillation for skin lesion segmentation.

Yichen Zhi1, Hongxia Bie2, Jiali Wang1

  • 1Department of Intelligent Media Computing Center, School of Artificial Intelligence, Beijing University of Posts and Telecommunications, Beijing, 100876, People's Republic of China.

Medical & Biological Engineering & Computing
|April 23, 2024
PubMed
Summary

This study introduces TEDMAE, a novel self-supervised learning method for skin lesion segmentation. TEDMAE enhances feature learning using a teacher-student architecture and data augmentation, improving accuracy in skin cancer analysis.

Keywords:
GeneralizationSelf-distillationSelf-supervisionSkin lesion segmentation

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Area of Science:

  • Medical Imaging
  • Computer Vision
  • Dermatology

Background:

  • Accurate skin lesion segmentation is crucial for skin cancer analysis.
  • Self-supervised learning, particularly Masked Autoencoders (MAE), shows promise in medical imaging by learning from unlabeled data.
  • Existing methods may struggle to capture both global structure and local details in dermoscopy images.

Purpose of the Study:

  • To introduce TEDMAE, a teacher-student architecture with self-distillation for enhanced skin lesion image segmentation.
  • To improve the learning of global and local features in dermoscopy images using self-supervised learning.
  • To enhance the generalizability of pre-trained models for skin lesion segmentation on unseen data.

Main Methods:

  • Developed a Teacher-Student architecture (TEDMAE) incorporating self-distillation for holistic feature learning.
  • Implemented Exterior Conversion Augmentation (EC) using convolutional kernels and linear interpolation for texture and intensity transformation.
  • Utilized Dynamic Feature Generation (DF) with a nonlinear attention mechanism for improved feature expressiveness and merging.

Main Results:

  • TEDMAE outperformed existing methods on ISIC2019, ISIC2017, and PH2 datasets.
  • Achieved optimal segmentation performance on ISIC2017 (Dice: 82.1%) and PH2 (Dice: 91.2%).
  • Demonstrated superior Jaccard (up to 84.5%) and HD95% (as low as 8.9%) scores, indicating strong generalization.

Conclusions:

  • TEDMAE effectively learns comprehensive global and local features for skin lesion segmentation.
  • The proposed EC and DF strategies significantly enhance model generalizability.
  • TEDMAE represents a significant advancement in self-supervised learning for medical image analysis, particularly in dermatology.