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Updated: Jun 27, 2025

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Availability of genome-matched therapy based on clinical practice
Naomi Hayashi1,2, Seiichi Mori3, Akihiro Ohmoto4,5
1Department of Genomic Medicine, Cancer Institute Hospital of Japanese Foundation for Cancer Research, 3-8-31 Ariake, Koto, Tokyo, 135-8550, Japan. naomi.hayashi@jfcr.or.jp.
Comprehensive genomic profiling (CGP) shows promise for advanced cancer patients, particularly for sarcoma and head and neck cancers. Early CGP may increase access to genome-matched therapies despite existing barriers.
Area of Science:
- Oncology
- Genomics
- Precision Medicine
Background:
- Comprehensive genomic profiling (CGP) offers potential for genome-matched therapies in advanced cancer.
- Current availability rates for these targeted therapies remain low.
- This study examines CGP utility and access barriers from a clinical viewpoint.
Purpose of the Study:
- To assess the utility of CGP in identifying druggable genomic alterations across various cancer types.
- To investigate barriers hindering patient access to genome-matched therapies.
- To propose strategies for improving therapy availability.
Main Methods:
- Retrospective analysis of 653 patients with 30 cancer types who underwent CGP.
- Identification of druggable genomic alterations and assessment of genome-matched therapy availability.
- Evaluation of barriers to accessing targeted therapies, including performance status.
Main Results:
- Overall genome-matched therapy availability was 9.5%.
- High rates of druggable alterations were found in thyroid (100%) and lung (76%) cancers; sarcoma had 15.2%.
- Therapy availability was highest for sarcoma (60%) and head and neck cancer (HNC) (40%).
- Multiple barriers affected 63.5% of patients; 11.8% were excluded due to poor performance status.
Conclusions:
- CGP is clinically useful for sarcoma and HNC, in addition to lung cancer.
- Front-line CGP has the potential to enhance genome-matched therapy accessibility.
- Addressing barriers is crucial for realizing the full benefit of precision oncology.
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