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Updated: Jun 27, 2025

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq
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Ocean to Tree: Leveraging Single-Molecule RNA-Seq to Repair Genome Gene Models and Improve Phylogenomic Analysis of

Jan Hsiao1, Lola Chenxi Deng1, Leonid L Moroz2,3

  • 1Molecular Neurobiology Laboratory, Salk Institute for Biological Study, La Jolla, CA, USA.

Methods in Molecular Biology (Clifton, N.J.)
|April 26, 2024
PubMed

Keywords:
CtenophoraDe novo transcriptomeGene family treeMechanosensitive ion channelsMnemiopsisPhylogenetic treesPhylogenomicsPiezoSingle-molecule sequencing PacBio SMRT

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