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Plastiome: Plastisphere-enriched mobile resistome in aquatic environments
Keerthi S Guruge1, Prasun Goswami1, Kazuki Kanda1
1Hygiene Management Group, National Institute of Animal Health, National Agriculture and Food Research Organization, 3-1-5 Kannondai, Tsukuba, Ibaraki 305-0856, Japan.
Abstract:
Aquatic microplastics (MPs) act as reservoirs for microbial communities, fostering the formation of a mobile resistome encompassing diverse antibiotic (ARGs) and biocide/metal resistance genes (BMRGs), and mobile genetic elements (MGEs). This collective genetic repertoire, referred to as the "plastiome," can potentially perpetuate environmental antimicrobial resistance (AMR). Our study examining two Japanese rivers near Tokyo revealed that waterborne MPs are primarily composed of polyethylene and polypropylene fibers and sheets of diverse origin. Clinically important genera like Exiguobacterium and Eubacterium were notably enriched on MPs. Metagenomic analysis uncovered a 3.46-fold higher enrichment of ARGs on MPs than those in water, with multidrug resistance genes (MDRGs) and BMRGs prevailing, particularly within MPs. Specific ARG and BMRG subtypes linked to resistance to vancomycin, beta-lactams, biocides, arsenic, and mercury showed selective enrichment on MPs. Network analysis revealed intense associations between host genera with ARGs, BMRGs, and MGEs on MPs, emphasizing their role in coselection. In contrast, river water exhibited weaker associations. This study underscores the complex interactions shaping the mobile plastiome in aquatic environments and emphasizes the global imperative for research to comprehend and effectively control AMR within the One Health framework.
Insights
Aquatic microplastics (MPs) harbor microbial communities, creating a mobile resistome that promotes environmental antimicrobial resistance (AMR). This study found significantly higher antibiotic resistance genes (ARGs) on MPs than in surrounding water.
Area of Science:
- Environmental Science
- Microbiology
- Genetics
Background:
- Aquatic microplastics (MPs) serve as vectors for microbial communities.
- These communities can harbor a mobile resistome, including antibiotic resistance genes (ARGs) and biocide/metal resistance genes (BMRGs).
- This 'plastiome' may contribute to the spread of antimicrobial resistance (AMR) in aquatic environments.
Purpose of the Study:
- To investigate the composition and resistome of microbial communities on MPs in Japanese rivers.
- To compare the abundance and types of ARGs and BMRGs on MPs versus surrounding water.
- To understand the role of MPs in the coselection and propagation of AMR.
Main Methods:
- Sampling of waterborne MPs (polyethylene and polypropylene fibers/sheets) from two rivers near Tokyo.
- Metagenomic analysis of microbial communities and their associated genes on MPs and in water.
- Network analysis to identify associations between microbial genera, resistance genes, and mobile genetic elements.
Main Results:
- MPs were primarily composed of polyethylene and polypropylene fibers and sheets.
- Clinically relevant genera like Exiguobacterium and Eubacterium were enriched on MPs.
- ARGs were 3.46-fold higher on MPs than in water, with multidrug resistance genes (MDRGs) and BMRGs being prevalent.
- Specific ARGs/BMRGs conferring resistance to vancomycin, beta-lactams, biocides, arsenic, and mercury were selectively enriched on MPs.
- Intense associations between host genera, ARGs, BMRGs, and MGEs were observed on MPs, indicating coselection.
Conclusions:
- Aquatic MPs significantly enrich ARGs and BMRGs, contributing to the mobile plastiome.
- MPs facilitate coselection and potential propagation of AMR in aquatic ecosystems.
- Understanding the plastiome is crucial for addressing the global challenge of AMR within the One Health framework.
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