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Deep learning models for atypical serotonergic cells recognition
Daniele Corradetti1, Alessandro Bernardi2, Renato Corradetti3
1Grupo de Fisica Matematica, Instituto Superior Tecnico, Av. Rovisco Pais, Lisboa, 1049-001, Portugal; Departamento de Matematica, Universidade do Algarve, Campus de Gambelas, Faro, 8005-139, Faro, Portugal.
Journal of Neuroscience Methods
|May 4, 2024
Summary
Deep learning models accurately identify typical and atypical serotonergic neurons, including those with unusual firing patterns. This advances the study of diverse serotonergic neuron activities in the brain.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Machine Learning
Background:
- The serotonergic system uses diverse neurons with varied electrophysiological properties.
- Current methods struggle to identify atypical serotonergic neurons, limiting research into their function.
Purpose of the Study:
- Develop deep learning models to accurately distinguish typical and atypical serotonergic neurons from non-serotonergic cells.
- Enable comprehensive study of the functional relevance of diverse serotonergic neuron activities.
Main Methods:
- Utilized in vitro electrophysiological recordings from identified serotonergic and non-serotonergic neurons.
- Employed convolutional neural networks (CNNs) for classification based on action potential characteristics.
- Trained models on a large dataset of real and synthetic action potential samples.
Main Results:
- Deep learning models achieved high accuracy in discriminating serotonergic neuron subtypes.
- Models demonstrated robustness and reliability when validated on independent, non-homogeneous datasets.
- Achieved over 94% accuracy in recognizing serotonergic neurons, including atypical ones.
Conclusions:
- The developed model reliably identifies both typical and atypical serotonergic neurons.
- The model is ready for experimental use and adaptable to various recording parameters.
- Facilitates broader investigation into the neurobiological roles of serotonergic system diversity.
Keywords:
Convolutional neural networksDeep learning modelsDorsal raphe nucleusSerotonergic neuronsSpike recognition
