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Updated: Jun 27, 2025

Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
An important consideration when expressing mAbs in Escherichiacoli
William B Siegall1, Rachel B Lyon2, Zvi Kelman3
1Institute for Bioscience and Biotechnology Research (IBBR), The University of Maryland (UMD), 9600 Gudelsky Drive, Rockville, MD, 20850, USA.
Abstract:
Monoclonal antibodies (mAbs) are a driving force in the biopharmaceutical industry. Therapeutic mAbs are usually produced in mammalian cells, but there has been a push towards the use of alternative production hosts, such as Escherichia coli. When the genes encoding for a mAb heavy and light chains are codon-optimized for E. coli expression, a truncated form of the heavy chain can form along with the full-length product. In this work, the role of codon optimization in the formation of a truncated product was investigated. This study used the amino acid sequences of several therapeutic mAbs and multiple optimization algorithms. It was found that several algorithms incorporate sequences that lead to a truncated product. Approaches to avoid this truncated form are discussed.

