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Published on: June 6, 2025
Gene Expression Profiling to Unfolded Proteins Response as a Risk Modulator of Patients with Rheumatoid Arthritis
Aleksandra Kucharska-Lusina1, Maciej Skrzypek1, Aleksandra Binda1
1Department of Clinical Chemistry and Biochemistry, Medical University of Lodz, 92-215 Lodz, Poland.
Abstract:
Rheumatoid arthritis (RA) is a chronic inflammatory disease. Despite new methods of diagnostics and treatment as well as extensive biological and immunosuppressive treatment, the etiology of RA is not fully understood. Moreover, the problem of diagnosis and treatment of RA patients is still current and affects a large group of patients. It is suggested that endoplasmic reticulum (ER)-related features may impair adaptation to chronic stress, inferring the risk of rheumatoid arthritis. The main goal in this study was evaluation of changes in mRNA translation to determine chronic ER stress conditions in rheumatoid arthritis patients. The study group consist of 86 individuals including a total of 56 rheumatoid arthritis patients and 30 healthy controls. The expression level of mRNA form blood samples of RA patients as well as controls of the unfolded protein response (UPR)-associated genes (p-eIF2, BCL-2, PERK, ATF4, and BAX) were investigated using real-time qPCR. GAPDH expression was used as a standard control. Considering the median, the expression levels of PERK, BCL-2, p-eIF2, ATF4, and BAX were found to be significantly increased in the blood of RA patients compared with the control group. The p-value for the PERK gene was 0.0000000036, the p-value for the BCL-2 gene was 0.000000014, the p-value for the p-eIF2 gene was 0.006948, the p-value for the ATF4 gene was 0.0000056, and the p-value for the BAX gene was 0.00019, respectively. Thus, it can be concluded that the targeting of the components of the PERK-dependent UPR signaling pathway via small-molecule PERK inhibitors may contribute to the development of novel, innovative treatment strategies against rheumatoid arthritis.
Insights
Chronic endoplasmic reticulum (ER) stress, indicated by increased mRNA translation of UPR genes like PERK and ATF4, is linked to rheumatoid arthritis (RA). Targeting the PERK pathway may offer new RA treatment strategies.
Area of Science:
- Molecular Biology
- Immunology
- Pathophysiology
Background:
- Rheumatoid arthritis (RA) is a chronic inflammatory disease with incompletely understood etiology.
- Endoplasmic reticulum (ER) stress is implicated in RA pathogenesis.
- Current treatments for RA, while advanced, still face challenges in diagnosis and management.
Purpose of the Study:
- To evaluate changes in mRNA translation as an indicator of chronic ER stress in RA patients.
- To investigate the expression of Unfolded Protein Response (UPR)-associated genes in RA patients compared to healthy controls.
Main Methods:
- Blood samples were collected from 56 RA patients and 30 healthy controls.
- Real-time quantitative PCR (qPCR) was used to measure mRNA expression levels.
- Expression of UPR-associated genes (PERK, BCL-2, p-eIF2, ATF4, BAX) and GAPDH was analyzed.
Main Results:
- Significantly increased expression of PERK, BCL-2, p-eIF2, ATF4, and BAX mRNA was observed in RA patients.
- Specific p-values highlight the statistical significance of these findings (e.g., PERK p=3.6x10^-9).
- These results indicate elevated chronic ER stress in RA patients.
Conclusions:
- The study demonstrates a link between ER stress, specifically the PERK-dependent UPR pathway, and rheumatoid arthritis.
- Targeting components of this pathway, such as with small-molecule PERK inhibitors, shows potential for novel RA therapeutic strategies.
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