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High-throughput Quantitative Real-time RT-PCR Assay for Determining Expression Profiles of Types I and III Interferon Subtypes
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Characterization and expression profiling of buffalo IFN-lambda family.

Devika Gautam1, Anil Sindhu2, Ashutosh Vats3

  • 1Animal Genomics Lab, Animal Biotechnology Centre, ICAR-National Dairy Research Institute (NDRI), Karnal, HR 132001, India; Deenbandhu Chhotu Ram University of Science and Technology, Murthal, Sonepat, HR 139031, India.

Veterinary Immunology and Immunopathology
|May 12, 2024
PubMed
Summary

This study details buffalo interferon lambda (IFN-λ) sequences and expression. Interferon lambda 3 (IFN-λ3) shows specific tissue and cell-type responses to viral and bacterial stimuli, highlighting its role in innate immunity.

Keywords:
BuffaloEpithelial CellFibroblast CellsIFN-λ3Innate immunityInterferons

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Area of Science:

  • Immunology
  • Molecular Biology
  • Genomics

Background:

  • Interferon lambda (IFN-λ), a type III interferon, is crucial for innate immunity against viral infections.
  • IFN-λ signals through JAK-STAT pathways, similar to type I interferons.
  • Understanding IFN-λ in livestock is vital for disease resistance.

Purpose of the Study:

  • To determine buffalo IFN-λ sequences and analyze their expression patterns.
  • To investigate IFN-λ responses to viral (poly I:C) and bacterial (MRSA) stimuli.
  • To elucidate the role of IFN-λ in buffalo innate immune responses.

Main Methods:

  • Polymerase chain reaction (PCR) to deduce IFN-λ sequences.
  • RT-qPCR to analyze gene expression in various tissues and cell types.
  • Induction with poly I:C and live Staphylococcus aureus (S. aureus).

Main Results:

  • Full-length sequences for buffalo IFN-λ3, IFN-λ receptors, and a variant of IFN-λ4 were determined; IFN-λ1 is a pseudogene.
  • IFN-λ3 expression was highest in lungs and monocytes, with cell-type-specific responses to poly I:C.
  • Endometrial epithelial cells expressed IFN-λ3 following S. aureus infection, indicating a role in bacterial defense.

Conclusions:

  • Buffalo possess diverse IFN-λ sequences with distinct expression profiles.
  • IFN-λ3 plays a significant role in both viral and bacterial innate immune responses in buffalo.
  • Tissue and cell-specific expression patterns highlight the complex regulation of IFN-λ in immune modulation.