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Updated: Jun 26, 2025

Single-Molecule Fluorescence Visualization of DNA Polymerase Dynamics at G-Quadruplexes
Published on: April 4, 2025
A G-quadruplex-binding platinum complex induces cancer mitochondrial dysfunction through dual-targeting mitochondrial
Keli Kuang1, Chunyan Li1, Fatlinda Maksut2,3
1Key Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry and Sichuan Province, Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, 610041, Chengdu, China.
Background:
G-quadruplex DNA (G4) is a non-canonical structure forming in guanine-rich regions, which play a vital role in cancer biology and are now being acknowledged in both nuclear and mitochondrial (mt) genome. However, the impact of G4-based targeted therapy on both nuclear and mt genome, affecting mt function and its underlying mechanisms remain largely unexplored.
Methods:
The mechanisms of action and therapeutic effects of a G4-binding platinum(II) complex, Pt-ttpy, on mitochondria were conducted through a comprehensive approaches with in vitro and in vivo models, including ICP-MS for platinum measurement, PCR-based genetic analysis, western blotting (WB), confocal microscope for mt morphology study, extracellular flux analyzer, JC1 and Annexin V apoptosis assay, flow cytometry and high content microscope screening with single-cell quantification of both ROS and mt specific ROS, as well as click-chemistry for IF study of mt translation. Decipher Pt-ttpy effects on nuclear-encoded mt related genes expression were undertaken via RNA-seq, Chip-seq and CUT-RUN assays.
Results:
Pt-ttpy, shows a highest accumulation in the mitochondria of A2780 cancer cells as compared with two other platinum(II) complexes with no/weak G4-binding properties, Pt-tpy and cisplatin. Pt-ttpy induces mtDNA deletion, copy reduction and transcription inhibition, hindering mt protein translation. Functional analysis reveals potent mt dysfunction without reactive oxygen species (ROS) induction. Mechanistic study provided first evidence that most of mt ribosome genes are highly enriched in G4 structures in their promoter regions, notably, Pt-ttpy impairs most nuclear-encoded mt ribosome genes' transcription through dampening the recruiting of transcription initiation and elongation factors of NELFB and TAF1 to their promoter with G4-enriched sequences. In vivo studies show Pt-ttpy's efficient anti-tumor effects, disrupting mt genome function with fewer side effects than cisplatin.
Conclusion:
This study underscores Pt-ttpy as a G4-binding platinum(II) complex, effectively targeting cancer mitochondria through dual action on mt and nuclear G4-enriched genomes without inducing ROS, offering promise for safer and effective platinum-based G4-targeted cancer therapy.
Insights
This study reveals a platinum complex, Pt-ttpy, effectively targets cancer mitochondria by impacting both nuclear and mitochondrial genomes. It disrupts mitochondrial function without increasing reactive oxygen species (ROS), offering a promising new cancer therapy.
Area of Science:
- Biochemistry
- Genomics
- Cancer Biology
Background:
- G-quadruplex DNA (G4) structures are increasingly recognized in nuclear and mitochondrial genomes and play roles in cancer.
- Targeted therapies exploiting G4 structures are emerging, but their impact on both genomes and mitochondrial function remains unclear.
Purpose of the Study:
- To investigate the mechanisms and therapeutic effects of the G4-binding platinum(II) complex, Pt-ttpy, on mitochondria in cancer cells.
- To explore the impact of Pt-ttpy on both nuclear and mitochondrial genomes and its influence on mitochondrial function.
Main Methods:
- Utilized in vitro and in vivo models with techniques including ICP-MS, PCR, Western blotting, confocal microscopy, extracellular flux analysis, JC1 and Annexin V assays, flow cytometry, and high-content microscopy.
- Employed RNA-seq, Chip-seq, and CUT-RUN assays to analyze the effects of Pt-ttpy on nuclear-encoded mitochondrial genes.
Main Results:
- Pt-ttpy preferentially accumulated in mitochondria and induced mitochondrial DNA (mtDNA) deletion, copy reduction, and transcription inhibition, hindering mitochondrial protein translation.
- Mitochondrial dysfunction was observed without inducing reactive oxygen species (ROS).
- Pt-ttpy was found to impair the transcription of nuclear-encoded mitochondrial ribosome genes by interfering with transcription factors binding to G4-enriched promoter regions.
Conclusions:
- Pt-ttpy demonstrates dual action on nuclear and mitochondrial G4-enriched genomes, effectively targeting cancer mitochondria.
- This G4-binding platinum complex offers a promising approach for safer and effective platinum-based G4-targeted cancer therapy with fewer side effects than cisplatin.
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