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Updated: Jun 26, 2025

Two- and Three-Dimensional Live Cell Imaging of DNA Damage Response Proteins
Published on: September 28, 2012
DNA damage induces p53-independent apoptosis through ribosome stalling
Nicolaas J Boon1,2, Rafaela A Oliveira1,2, Pierré-René Körner1,3
1Oncode Institute, Utrecht, Netherlands.
Abstract:
In response to excessive DNA damage, human cells can activate p53 to induce apoptosis. Cells lacking p53 can still undergo apoptosis upon DNA damage, yet the responsible pathways are unknown. We observed that p53-independent apoptosis in response to DNA damage coincided with translation inhibition, which was characterized by ribosome stalling on rare leucine-encoding UUA codons and globally curtailed translation initiation. A genetic screen identified the transfer RNAse SLFN11 and the kinase GCN2 as factors required for UUA stalling and global translation inhibition, respectively. Stalled ribosomes activated a ribotoxic stress signal conveyed by the ribosome sensor ZAKα to the apoptosis machinery. These results provide an explanation for the frequent inactivation of SLFN11 in chemotherapy-unresponsive tumors and highlight ribosome stalling as a signaling event affecting cell fate in response to DNA damage.
Insights
DNA damage triggers apoptosis even without p53. This involves ribosome stalling, translation inhibition, and activation of the SLFN11 and GCN2 pathways, revealing new cell death mechanisms.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- The tumor suppressor p53 is a key mediator of apoptosis following DNA damage.
- However, p53-independent apoptotic pathways in response to DNA damage remain largely uncharacterized.
- Understanding these alternative pathways is crucial for cancer therapy.
Purpose of the Study:
- To elucidate the molecular mechanisms underlying p53-independent apoptosis induced by DNA damage.
- To identify key factors and signaling events involved in this process.
Main Methods:
- Utilized genetic screening to identify factors involved in DNA damage-induced apoptosis.
- Analyzed translation inhibition, ribosome stalling on UUA codons, and ribotoxic stress signaling.
- Investigated the roles of SLFN11, GCN2, and ZAKα in the apoptotic pathway.
Main Results:
- p53-independent apoptosis upon DNA damage was associated with translation inhibition.
- Ribosome stalling on UUA codons and global translation initiation curtailment were observed.
- SLFN11 and GCN2 were identified as critical for UUA stalling and translation inhibition, respectively.
- Stalled ribosomes initiated a ribotoxic stress signal via ZAKα, leading to apoptosis.
Conclusions:
- Ribosome stalling acts as a critical signaling event in p53-independent apoptosis following DNA damage.
- The SLFN11-mediated pathway explains ribosome stalling and contributes to DNA damage-induced cell death.
- Findings offer insights into chemotherapy resistance in tumors with SLFN11 inactivation.
Related Concept Videos
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The Intrinsic Apoptotic Pathway
Negative Regulator Molecules
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DNA Damage Can Stall the Cell Cycle

