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Survival in metastatic microsatellite-stable colorectal cancer correlated with tumor mutation burden and mutations
Nicholas Taflin1, Lyndsey Sandow2, Rajat Thawani3
1Division of Oncology, Department of Internal Medicine, The University of Utah, Salt Lake City, UT, USA.
Background:
Next-generation sequencing (NGS) identifies mutations and molecular abnormalities within tumors, including tumor mutation burden (TMB). If a solid tumor has high TMB, immune checkpoint inhibitors (ICIs) are approved as an option for treatment. Studies have been inconclusive regarding how effective ICI are in treating patients with colorectal cancer (CRC), and it is unclear if high TMB is a good prognostic marker for CRC. We collected data from NGS of CRC and correlated survival to both TMB and mutations of interest, as well as investigated the efficacy of ICI.
Methods:
This was a retrospective cohort analysis at a single institution, collecting NGS data from January 2018 to December 2020 in patients with CRC who were microsatellite-stable (MSS), n=161. Demographics, clinical data, and results from NGS were collected, and a survival analysis looking at TMB and selected mutations of interest was performed. Patients who were treated with ICI were assessed in a descriptive subset analysis.
Results:
Patients with CRC who were MSS and had high TMB trended towards worse survival [hazard ratio (HR) =1.38] though the result was not significant (P=0.28). Survival was significantly worse in patients with a KRAS mutation (HR =1.71, P=0.04) and/or a CDKN2A mutation (HR =4.45, P<0.001). In this study population, 12 patients with high TMB had treatment with ICI, with nine of these patients having shorter progression-free survival (PFS) between 0.7 and 4.1 months, and three patients having longer PFS of 26.3, 24.7, and 13.2 months.
Conclusions:
High TMB in MSS CRC did not show statistical difference in outcome. Mutations in KRAS and/or CDKN2A correlated with worse prognosis. Some patients with MSS CRC and high TMB responded to ICI, though there is a need to identify a better biomarker to predict which patients will have a good response to ICI therapy.
Insights
High tumor mutation burden (TMB) did not significantly impact survival in microsatellite-stable colorectal cancer (CRC). Specific mutations like KRAS and CDKN2A correlated with worse prognosis, necessitating better biomarkers for immune checkpoint inhibitor (ICI) therapy response in CRC patients.
Area of Science:
- Oncology
- Genomics
- Cancer Therapeutics
Background:
- Next-generation sequencing (NGS) detects tumor mutation burden (TMB), a biomarker for immune checkpoint inhibitor (ICI) efficacy in solid tumors.
- The prognostic value of high TMB and ICI effectiveness in microsatellite-stable (MSS) colorectal cancer (CRC) remain inconclusive.
- This study investigates the correlation between TMB, specific mutations, and patient outcomes in MSS CRC.
Purpose of the Study:
- To evaluate the prognostic significance of high TMB in MSS colorectal cancer.
- To assess the impact of specific mutations (KRAS, CDKN2A) on survival in MSS CRC.
- To explore the efficacy of immune checkpoint inhibitors (ICIs) in a subset of MSS CRC patients with high TMB.
Main Methods:
- Retrospective cohort analysis of 161 MSS colorectal cancer patients.
- Collected and analyzed next-generation sequencing (NGS) data for TMB and mutations of interest.
- Performed survival analysis and descriptive subset analysis for patients treated with ICIs.
Main Results:
- High TMB in MSS CRC showed a trend towards worse survival (HR=1.38, P=0.28) but was not statistically significant.
- KRAS (HR=1.71, P=0.04) and CDKN2A (HR=4.45, P<0.001) mutations were significantly associated with worse survival.
- Among 12 high TMB MSS CRC patients treated with ICIs, 3 showed prolonged progression-free survival (PFS), while 9 had shorter PFS.
Conclusions:
- High TMB is not a statistically significant prognostic marker for MSS colorectal cancer.
- KRAS and CDKN2A mutations are associated with poorer prognosis in MSS CRC.
- While some MSS CRC patients with high TMB responded to ICIs, further research is needed to identify predictive biomarkers for ICI therapy.
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