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Updated: Jun 25, 2025

Analyzing and Building Nucleic Acid Structures with 3DNA
Published on: April 26, 2013
Molecular insights into the prototypical single-stranded DNA-binding protein from E. coli
Nina J Bonde1,2, Alexander G Kozlov3, Michael M Cox1
1Department of Biochemistry, University of WI-Madison, Madison, Wisconsin, USA.
Abstract:
The SSB protein of Escherichia coli functions to bind single-stranded DNA wherever it occurs during DNA metabolism. Depending upon conditions, SSB occurs in several different binding modes. In the course of its function, SSB diffuses on ssDNA and transfers rapidly between different segments of ssDNA. SSB interacts with many other proteins involved in DNA metabolism, with 22 such SSB-interacting proteins, or SIPs, defined to date. These interactions chiefly involve the disordered and conserved C-terminal residues of SSB. When not bound to ssDNA, SSB can aggregate to form a phase-separated biomolecular condensate. Current understanding of the properties of SSB and the functional significance of its many intermolecular interactions are summarized in this review.
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