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Updated: Jun 25, 2025

Segmentation and Linear Measurement for Body Composition Analysis using Slice-O-Matic and Horos
Published on: March 21, 2021
Using a new artificial intelligence-aided method to assess body composition CT segmentation in colorectal cancer
Ke Cao1, Josephine Yeung1, Yasser Arafat1,2
1Department of Surgery, Western Precinct, University of Melbourne, Melbourne, Victoria, Australia.
An AI model accurately segments and quantifies body composition from CT scans in colorectal cancer patients. This automated system shows high precision for muscle and adipose tissue analysis at the L3 region.
Area of Science:
- Radiology
- Medical Imaging
- Artificial Intelligence in Medicine
Background:
- Assessing body composition in colorectal cancer (CRC) patients is crucial for treatment planning and prognosis.
- Computed tomography (CT) scans provide valuable data for body composition analysis, particularly at the L3 vertebral level.
- Automated segmentation using artificial intelligence (AI) offers a potential solution for efficient and accurate body composition assessment.
Purpose of the Study:
- To evaluate the accuracy of an AI-generated model for automated segmentation and quantification of body composition from CT slices.
- To assess the performance of the AI model in analyzing muscle, visceral adipose tissue (VAT), and subcutaneous adipose tissue (SAT) at the L3 region in CRC patients.
Main Methods:
- A U-Net convolutional neural network was trained on 338 CT slices from 319 CRC patients.
- Manual segmentation served as the ground truth for training and validation.
- Segmentation performance was assessed using Dice similarity coefficients on validation (68 slices) and test (203 slices) datasets.
Main Results:
- The AI model achieved excellent segmentation performance, with Dice similarity coefficients >0.98 for validation and >0.97 for test datasets.
- Strong positive correlations (Spearman's correlation coefficients: 0.944-0.999) were observed between manual and AI measurements of body composition.
- The AI system demonstrated high accuracy in quantifying cross-sectional area and Hounsfield unit density for muscle, VAT, and SAT.
Conclusions:
- The fully automated AI segmentation system demonstrates high accuracy in assessing and quantifying abdominal muscle and adipose tissues from L3 CT slices in CRC patients.
- This AI model serves as a reliable tool, comparable to the gold standard, for body composition analysis in clinical settings.
- The study validates the utility of AI in streamlining body composition assessment, aiding in the management of colorectal cancer.
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