Related Experiment Video
Updated: Oct 11, 2026

In Vivo Functional Study of Disease-associated Rare Human Variants Using Drosophila
Published on: August 20, 2019
C4 phenotypic variation suggests an unusual class III gene organization
Insights
Genetic analysis of complement C4A, C4B, C2, and BF genes in families revealed a duplicated C4A locus. This common haplotype in Northern Europeans influences complement gene inheritance patterns.
Area of Science:
- Immunogenetics
- Human Genetics
- Molecular Biology
Background:
- The complement system, particularly the C4 gene locus, plays a crucial role in immune responses.
- Understanding the genetic variations and inheritance patterns of complement genes is essential for studying immune-related diseases.
Purpose of the Study:
- To investigate the genetic inheritance of class III complement gene markers (C4A, C4B, C2, BF) within HLA-genotyped families.
- To analyze unusual inheritance patterns of C4A electrophoretic phenotypes and their association with other genetic markers.
Main Methods:
- Family-based genetic typing of C4A, C4B, C2, and BF genes.
- HLA genotyping of 26 families.
- Electrophoretic phenotyping of C4A variants.
Main Results:
- An inheritance pattern inconsistent with a single C4A locus was observed in 6 out of 26 families, suggesting a duplicated C4A locus.
- This duplicated C4A locus haplotype (C4A 3, A 2) is prevalent in Northern Europeans (≥6% frequency).
- The C4A 3, A 2 variant was associated with specific HLA-B alleles (HLA-Bw35, HLA-Bw55) and a distinct complotype (FC3/20).
Conclusions:
- The findings indicate the existence and frequency of a duplicated C4A locus haplotype in Northern European populations.
- This genetic variation may influence complement system function and susceptibility to certain immune-related conditions.
- Further research is warranted to explore the functional implications of this duplicated C4A locus.
Abstract:
The class III gene markers, C4A, C4B, C2 and BF were determined in 26 HLA genotyped families. In 6 of these families the inheritance of the C4A electrophoretic phenotype, C4A 3, A 2 could not be explained assuming the genetic model that the C4A component is controlled by only one locus (C4A) and suggests that both C4A 3 and C4A 2 are encoded by the same chromosome. This apparently duplicated C4A locus haplotype is common in Northern Europeans occurring at a frequency of at least 6%. In 4 families the C4A 3, A 2 'variant' occurred together with HLA-Bw35 and in 2 together with HLA-Bw55. Furthermore, it was striking that in each family the C4A 3, A 2 'variant' was found exclusively with the complotype FC3/20 which encodes no phenotypically expressed C4B locus product.
More Related Videos
Related Concept Videos
Position-effect Variegation
Cis-regulatory Sequences
Incomplete Dominance
Background and Environment Affect Phenotype
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
Exon Recombination
Exon shuffling follows “splice frame rules.” Each exon has three reading...
Cis-regulatory Sequences

