Related Experiment Video
Updated: May 11, 2026

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
16S rRNA Gene Sequencing of Gut Microbiota in Rheumatoid Arthritis Treated with 99Tc-MDP
Zhaowei Huang1,2, Changming Chen3, Linlin Tan4
1Graduate School, Shanghai University of Traditional Chinese Medicine, Shanghai, People's Republic of China.
Background:
Rheumatoid arthritis (RA) is a common autoimmune disease with the main symptoms being joint swelling and pain. In severe cases, joint deformity or even complete loss of function occurs. Technetium methylene diphosphonate (99Tc-MDP) is widely used for RA treatment in China, but there are no studies on the effects of 99Tc-MDP on intestinal flora.
Objective:
To explore the effects of 99Tc-MDP treatment on the composition and function of the intestinal flora and to provide new information on the mechanism of 99Tc-MDP in RA treatment.
Methods:
Stool samples from RA patients before and after 99Tc-MDP treatment were collected to form two groups (Before and After). Total genomic DNA of the samples was extracted for 16S rRNA gene sequencing. The altered composition of the intestinal flora, the key target bacteria regulated by 99Tc-MDP, and the pathways of action of 99 Tc-MDP were analyzed by bioinformatics.
Results:
A total of 64 fresh stool samples were collected from 32 RA patients. Compared to the Before group, the After group showed increased Bacteroidetes abundance and decreased Firmicutes abundance. At the genus level, Prevotella increased whereas Escherichia decreased. Both α and β diversity analyses showed that 99Tc-MDP treatment did not affect gut microbial diversity in RA patients. LEfSe analyses and random forest analyses showed Bacteroidetes, Prevotella, Enterococcus, Escherichia and Ruminococcaceae were the main 99Tc-MDP regulating bacteria. Functional enrichment analysis revealed that the functional differences in gut flora of the two groups centered on Metabolism and Genetic Information Processing.
Conclusion:
This study revealed differences in the composition of the gut microbiota in RA patients before and after 99Tc-MDP treatment. The therapeutic effect of 99Tc MDP is mainly achieved through Bacteroidetes, Prevotella, and Enterococcus. Regulating metabolism and genetic information processing of gut flora may be the mechanism of 99Tc-MDP in treating RA.
Insights
Technetium methylene diphosphonate (99Tc-MDP) treatment for rheumatoid arthritis alters gut microbiota composition, increasing Bacteroidetes and Prevotella while decreasing Firmicutes and Escherichia. This suggests a potential mechanism involving the regulation of metabolism and genetic information processing in the gut flora.
Area of Science:
- Microbiome research
- Autoimmune disease mechanisms
- Pharmacology
Background:
- Rheumatoid arthritis (RA) is a prevalent autoimmune condition causing joint inflammation and potential deformity.
- Technetium methylene diphosphonate (99Tc-MDP) is a common RA treatment in China, but its impact on the gut microbiome is unstudied.
Purpose of the Study:
- To investigate the effects of 99Tc-MDP on the composition and function of intestinal flora in RA patients.
- To elucidate the underlying mechanisms of 99Tc-MDP's therapeutic action in RA.
Main Methods:
- Collected stool samples from 32 RA patients before and after 99Tc-MDP treatment.
- Performed 16S rRNA gene sequencing and bioinformatics analysis to assess gut microbiota changes.
- Analyzed alterations in bacterial composition, key regulated bacteria, and functional pathways.
Main Results:
- 99Tc-MDP treatment increased Bacteroidetes and Prevotella abundance, while decreasing Firmicutes and Escherichia.
- Gut microbial diversity (alpha and beta) remained unaffected by 99Tc-MDP treatment.
- Key bacteria regulated by 99Tc-MDP included Bacteroidetes, Prevotella, Enterococcus, Escherichia, and Ruminococcaceae.
- Functional analysis indicated that Metabolism and Genetic Information Processing pathways were significantly altered.
Conclusions:
- 99Tc-MDP treatment significantly alters the gut microbiota composition in RA patients.
- The therapeutic efficacy of 99Tc-MDP is associated with the modulation of specific bacteria like Bacteroidetes, Prevotella, and Enterococcus.
- Regulation of gut flora's metabolic and genetic processing functions may represent a key mechanism for 99Tc-MDP in RA treatment.
Related Concept Videos
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...
Introduction to the Human Microbiota
Inflammatory Bowel Disease III: Crohn's Disease

