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Widespread horizontal gene transfer between plants and bacteria.

Shelly Haimlich1, Yulia Fridman2, Hitaishi Khandal2

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Plants and bacteria engage in frequent gene exchange, with 75 unique genes transferred between them. This horizontal gene transfer (HGT) impacts plant metabolism and immunity, demonstrating a dynamic cross-kingdom interaction.

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Area of Science:

  • Microbiology
  • Plant Biology
  • Genetics

Background:

  • Plants host diverse bacteria, crucial for nutrient exchange and immunity.
  • Long-term plant-microbe associations may facilitate gene transfer.
  • Horizontal gene transfer (HGT) is a rare but significant evolutionary mechanism.

Purpose of the Study:

  • To investigate cross-kingdom HGT between Arabidopsis thaliana and its microbiome.
  • To identify genes transferred between plants and bacteria.
  • To functionally validate the impact of transferred genes on plant traits.

Main Methods:

  • Genomic analysis of Arabidopsis thaliana and its associated microbiome.
  • Bioinformatic identification of horizontally transferred genes.
  • Functional complementation assays using bacterial gene homologs in Arabidopsis mutants.

Main Results:

  • Identified 75 unique genes transferred between plants and bacteria.
  • Detected bidirectional gene exchange, enriched in carbohydrate metabolism.
  • Discovered bacterial genes involved in auxin biosynthesis transferred to plants.
  • Demonstrated functional complementation of Arabidopsis DET2 mutant by a bacterial homolog.

Conclusions:

  • Cross-kingdom HGT is a significant factor shaping plant-microbe interactions.
  • Gene transfer influences plant metabolic capabilities and hormone biosynthesis.
  • Horizontally transferred genes can restore essential plant functions.