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ComPRePS: An Automated Cloud-based Image Analysis tool to democratize AI in Digital Pathology.
Sayat Mimar1, Anindya S Paul1, Nicholas Lucarelli1
1Quantitative Health Section, Division of Nephrology, Hypertension, and Renal Transplantation, Department of Medicine, University of Florida, Gainesville, FL.
We developed ComPRePS, an automated computational renal pathology suite using artificial intelligence (AI) for whole-slide images (WSI). This platform democratizes AI-based digital pathology analysis for improved diagnostics and precision medicine.
Area of Science:
- Digital pathology
- Computational biology
- Artificial intelligence in healthcare
Background:
- High-resolution whole-slide imaging (WSI) generates gigapixel-scale data.
- Deep neural network (DNN)-based AI and improved computing enable advanced image analysis.
- Standardized data management principles like FAIR are crucial for biomedical research.
Purpose of the Study:
- To democratize AI-based image analysis in digital pathology.
- To introduce ComPRePS, an automated Computational Renal Pathology Suite.
- To enhance disease diagnostics and prognostics for precision medicine.
Main Methods:
- Developed ComPRePS, an end-to-end automated suite.
- Integrated massive scalability, cloud computing, and a web-based user interface.
- Utilized sophisticated AI algorithms for WSI analysis and feature extraction.
Main Results:
- ComPRePS provides on-demand cloud computing and data management for WSIs.
- The platform facilitates easy data upload, storage, and visualization.
- AI algorithms identify functional tissue units and extract relevant image features.
Conclusions:
- ComPRePS offers a scalable and user-friendly solution for AI-driven digital pathology.
- The suite supports improved diagnostics and prognostics in renal pathology.
- This platform advances precision medicine through accessible AI-based image analysis.
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