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Updated: Jun 7, 2026

Identification of Disease-related Spatial Covariance Patterns using Neuroimaging Data
Published on: June 26, 2013
Multiparametric Characterization and Spatial Distribution of Different MS Lesion Phenotypes
Francesco Tazza1, Giacomo Boffa1, Simona Schiavi1
1From the Departments of Neuroscience, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health (F.T., G.B., S.S., E.C., M.I., M.C.), University of Genoa, Genoa, Italy.
Background And Purpose:
MS lesions exhibit varying degrees of axonal and myelin damage. A comprehensive description of lesion phenotypes could contribute to an improved radiologic evaluation of smoldering inflammation and remyelination processes. This study aimed to identify in vivo distinct MS lesion types using quantitative susceptibility mapping and susceptibility mapping-weighted imaging and to characterize them through T1-relaxometry, myelin mapping, and diffusion MR imaging. The spatial distribution of lesion phenotypes in relation to ventricular CSF was investigated.
Materials And Methods:
MS lesions of 53 individuals were categorized into iso- or hypointense lesions, hyperintense lesions, and paramagnetic rim lesions, on the basis of their appearance on quantitative susceptibility mapping alone, according to published criteria, and with the additional support of susceptibility mapping-weighted imaging. Susceptibility values, T1-relaxation times, myelin and free water fractions, intracellular volume fraction, and the orientation dispersion index were compared among lesion phenotypes. The distance of the geometric center of each lesion from the ventricular CSF was calculated.
Results:
Eight hundred ninety-six MS lesions underwent the categorization process using quantitative susceptibility mapping and susceptibility mapping-weighted imaging. The novel use of susceptibility mapping-weighted images, which revealed additional microvasculature details, led us to re-allocate several lesions to different categories, resulting in a 35.6% decrease in the number of paramagnetic rim lesions, a 22.5% decrease in hyperintense lesions, and a 17.2% increase in iso- or hypointense lesions, with respect to the categorization based on quantitative susceptibility mapping only. The outcome of the categorization based on the joint use of quantitative susceptibility mapping and susceptibility mapping-weighted imaging was that 44.4% of lesions were iso- or hypointense lesions, 47.9% were hyperintense lesions, and 7.7% were paramagnetic rim lesions. A worsening gradient was observed from iso- or hypointense lesions to hyperintense lesions to paramagnetic rim lesions in T1-relaxation times, myelin water fraction, free water fraction, and intracellular volume fraction. Paramagnetic rim lesions were located closer to ventricular CSF than iso- or hypointense lesions. The volume of hyperintense lesions was associated with a more severe disease course.
Conclusions:
Quantitative susceptibility mapping and susceptibility mapping-weighted imaging allow in vivo classification of MS lesions into different phenotypes, characterized by different levels of axonal and myelin loss and spatial distribution. Hyperintense lesions and paramagnetic rim lesions, which have the most severe microstructural damage, were more often observed in the periventricular WM and were associated with a more severe disease course.
Insights
Quantitative susceptibility mapping and susceptibility mapping-weighted imaging classify multiple sclerosis lesions by phenotype. More severe lesions, like paramagnetic rim lesions, indicate greater damage and are linked to a worse disease course.
Area of Science:
- Neuroimaging
- Radiology
- Biomedical Engineering
Background:
- Multiple sclerosis (MS) lesions show varied axonal and myelin damage.
- Understanding lesion phenotypes aids evaluation of smoldering inflammation and remyelination.
- Distinct lesion characterization is crucial for MS progression assessment.
Purpose of the Study:
- Identify distinct MS lesion types in vivo using quantitative susceptibility mapping (QSM) and susceptibility mapping-weighted imaging (SWI).
- Characterize these phenotypes using T1-relaxometry, myelin mapping, and diffusion MRI.
- Investigate lesion distribution relative to the ventricular cerebrospinal fluid (CSF).
Main Methods:
- Categorized 53 individuals' MS lesions into iso/hypointense, hyperintense, and paramagnetic rim types using QSM and SWI.
- Compared susceptibility values, T1-relaxation times, myelin/free water fractions, and intracellular volume fraction among phenotypes.
- Calculated lesion distance from the ventricular CSF.
Main Results:
- SWI revealed microvasculature, refining lesion categorization (35.6% fewer paramagnetic rim, 22.5% fewer hyperintense lesions).
- Final categorization: 44.4% iso/hypointense, 47.9% hyperintense, 7.7% paramagnetic rim lesions.
- Observed a gradient of increasing damage (T1, myelin water, free water, intracellular volume) from iso/hypointense to paramagnetic rim lesions; paramagnetic rim lesions were closer to CSF and hyperintense lesions correlated with disease severity.
Conclusions:
- QSM and SWI enable in vivo classification of MS lesions into distinct phenotypes.
- Phenotypes correlate with axonal/myelin loss and spatial distribution.
- Hyperintense and paramagnetic rim lesions, indicative of severe microstructural damage, are periventricular and associated with a more severe disease course.

