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Published on: June 28, 2024
Mechanism of phage sensing and restriction by toxin-antitoxin-chaperone systems
Toomas Mets1, Tatsuaki Kurata2, Karin Ernits2
1Department of Experimental Medical Science, Lund University, 221 00 Lund, Sweden; University of Tartu, Institute of Technology, 50411 Tartu, Estonia.
Abstract:
Toxin-antitoxins (TAs) are prokaryotic two-gene systems composed of a toxin neutralized by an antitoxin. Toxin-antitoxin-chaperone (TAC) systems additionally include a SecB-like chaperone that stabilizes the antitoxin by recognizing its chaperone addiction (ChAD) element. TACs mediate antiphage defense, but the mechanisms of viral sensing and restriction are unexplored. We identify two Escherichia coli antiphage TAC systems containing host inhibition of growth (HigBA) and CmdTA TA modules, HigBAC and CmdTAC. HigBAC is triggered through recognition of the gpV major tail protein of phage λ. Chaperone HigC recognizes gpV and ChAD via analogous aromatic molecular patterns, with gpV outcompeting ChAD to trigger toxicity. For CmdTAC, the CmdT ADP-ribosyltransferase toxin modifies mRNA to halt protein synthesis and limit phage propagation. Finally, we establish the modularity of TACs by creating a hybrid broad-spectrum antiphage system combining the CmdTA TA warhead with a HigC chaperone phage sensor. Collectively, these findings reveal the potential of TAC systems in broad-spectrum antiphage defense.
Insights
Prokaryotic toxin-antitoxin-chaperone (TAC) systems defend against phages. Researchers uncovered how two Escherichia coli TAC systems, HigBAC and CmdTAC, recognize and neutralize viral threats, revealing potential for broad-spectrum phage defense.
Area of Science:
- Microbiology
- Molecular Biology
- Bacteriology
Background:
- Toxin-antitoxin (TA) systems are prokaryotic genetic elements.
- Toxin-antitoxin-chaperone (TAC) systems include a chaperone that stabilizes the antitoxin.
- The mechanisms of TAC-mediated antiphage defense are largely unknown.
Purpose of the Study:
- To investigate the mechanisms of two Escherichia coli antiphage TAC systems: HigBAC and CmdTAC.
- To explore how these TAC systems sense and restrict phage infection.
- To assess the potential for engineering novel phage defense strategies using TAC systems.
Main Methods:
- Identification and characterization of HigBAC and CmdTAC antiphage systems in E. coli.
- Analysis of the interaction between the HigC chaperone, phage λ gpV protein, and the ChAD element.
- Investigation of the CmdT toxin's mechanism of inhibiting protein synthesis.
- Construction and testing of a hybrid TAC system.
Main Results:
- HigBAC is activated by the phage λ gpV protein, which outcompetes the ChAD element for binding to the HigC chaperone.
- CmdTAC utilizes the CmdT toxin, an ADP-ribosyltransferase, to modify mRNA and inhibit phage protein synthesis.
- A hybrid TAC system was successfully created, demonstrating modularity and broad-spectrum potential.
Conclusions:
- TAC systems employ distinct mechanisms for phage sensing and restriction.
- The HigBAC system uses molecular mimicry for phage detection.
- The CmdTAC system directly interferes with phage protein synthesis.
- TAC systems offer a versatile platform for developing novel antiphage strategies.
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