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Published on: July 7, 2020
Genetic alterations in the pmrAB two-component system and lipid A biosynthesis genes of polymyxin-resistant
Nadia El Mrimar1,2, El Mehdi Belouad1,2, Elmostafa Benaissa1,2
11Research Team of Epidemiology and Bacterial Resistance, Faculty of Medicine and Pharmacy, Mohammed V University in Rabat, Rabat, Morocco.
Abstract:
The rate of pandrug-resistant Acinetobacter baumannii strains is on the rise in all continents. This bacterium can acquire resistance to all antibiotics, even to colistin. Alterations in the lipid A or/and the two-component pmrAB were earlier detected in colistin resistance. We investigated and analyzed two strains of A. baumannii (ABRC1 and ABRC2) isolated from two patients admitted to intensive care unit with a septic shock. Both strains were resistant to all tested antibiotics including colistin with a MIC >256 mg L-1. Colistin resistance genes (pmrA, pmrB, lpxA, lpxC, lpxD, and lpsB) of two strains (ABRC1 and ABRC2) were investigated by PCR and sequencing. Obtained nucleic acid sequences were aligned with reference sequences of ATCC 19606 and 17987. In this study two amino acid mutations, N287D in the lpxC gene and E117K in the lpxD gene, were detected in both ABRC1 and ABRC2 strains. ABRC1 had an additional H200L mutation in the pmrA gene. Both colistin resistant strains harbored the same A138T mutation in the pmrB gene. The ABRC2 strain also had an alteration in the kinase domain, specifically an R263S substitution of the histidine kinase domain. Three identical mutations were found in the lpsB gene of both A. baumannii strains: Q216K + H218G + S219E. As a result, a newly deduced protein sequence in both ABRC1 and ABRC2 strains differed from those described in ATCC 17978 and 19606 strains was determined. Colistin resistance is multifactorial in A. baumannii. In our study we detected novel mutations in colistin resistant A. baumannii clinical isolates.
Insights
Pandrug-resistant Acinetobacter baumannii strains are increasing globally. This study identified novel mutations in colistin resistance genes of two clinical isolates, highlighting the multifactorial nature of antibiotic resistance.
Area of Science:
- Microbiology
- Genetics
- Infectious Diseases
Background:
- Pandrug-resistant Acinetobacter baumannii poses a significant global health threat.
- Colistin resistance in A. baumannii is often linked to alterations in lipid A or the pmrAB two-component system.
Purpose of the Study:
- To investigate the genetic basis of colistin resistance in two clinical isolates of A. baumannii (ABRC1 and ABRC2).
- To identify novel mutations associated with extreme colistin resistance.
Main Methods:
- Isolating and characterizing two A. baumannii strains (ABRC1, ABRC2) with high colistin resistance (MIC >256 mg/L).
- Utilizing PCR and sequencing to analyze colistin resistance genes (pmrA, pmrB, lpxA, lpxC, lpxD, lpsB).
- Comparing obtained sequences with reference strains (ATCC 19606, 17987).
Main Results:
- Both strains exhibited novel mutations: N287D in lpxC and E117K in lpxD.
- ABRC1 showed an additional H200L mutation in pmrA.
- Both strains shared an A138T mutation in pmrB, and ABRC2 had an R263S substitution in its histidine kinase domain.
- Three mutations (Q216K, H218G, S219E) were identified in the lpsB gene of both strains.
Conclusions:
- Colistin resistance in A. baumannii is a complex, multifactorial trait.
- Novel mutations in lpxC, lpxD, pmrA, pmrB, and lpsB contribute to extreme colistin resistance in clinical isolates.
- These findings enhance our understanding of antibiotic resistance mechanisms in A. baumannii.
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