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Labeling DNA Probes03:31

Labeling DNA Probes

DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...

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A fluorescent probe based on cyclochalcone for detecting peroxynitrite.

Li-Hao Liu1, Xian-Zhao Shang1, Jian-Hao Yuan1

  • 1Key Laboratory of Optic-Electric Sensing and Analytical Chemistry for Life Science, MOE, College of Chemistry and Molecular Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China.

Photochemical & Photobiological Sciences : Official Journal of the European Photochemistry Association and the European Society for Photobiology
|June 5, 2024
PubMed
Summary

A new fluorescent probe, C-PN, detects peroxynitrite (ONOO-) by changing color and fluorescence. This probe offers rapid, selective, and stable detection of ONOO- for potential applications.

Keywords:
ChalconeFluorescent probePeroxynitrite

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Area of Science:

  • Analytical Chemistry
  • Biochemistry
  • Materials Science

Background:

  • Peroxynitrite (ONOO-) is a reactive nitrogen species implicated in various physiological and pathological processes.
  • Sensitive and selective detection methods for ONOO- are crucial for biological and medical research.
  • Fluorescent probes offer advantages in sensitivity and real-time monitoring for reactive species detection.

Purpose of the Study:

  • To synthesize and characterize a novel cyclic chalcone fluorescent probe, C-PN.
  • To evaluate the probe's performance for the detection of peroxynitrite (ONOO-).
  • To investigate the mechanism of fluorescence change upon reaction with ONOO-.

Main Methods:

  • Synthesis of the cyclic chalcone fluorescent probe C-PN.
  • Spectroscopic analysis (fluorescence and UV-Vis) to study the probe's response to ONOO-.
  • Evaluation of probe selectivity, stability, response time, and detection limit.

Main Results:

  • The synthesized probe C-PN exhibited a distinct color change and fluorescence shift upon reaction with ONOO-.
  • The probe demonstrated a short response time (<60 s) and good selectivity and stability for ONOO-.
  • A low detection limit of 20.2 nM was achieved, enabling sensitive detection of ONOO-.

Conclusions:

  • The novel cyclic chalcone fluorescent probe C-PN is effective for the naked-eye and fluorescence detection of ONOO-.
  • The probe's mechanism involves the disconnection of the double bond in the cyclic chalcone structure, altering intramolecular charge transfer.
  • C-PN shows promise as a reliable tool for ONOO- sensing in relevant chemical and biological contexts.