Cytoskeletal gene alterations linked to sorafenib resistance in hepatocellular carcinoma

Hong Xiao1, Hangyu Chen2, Lei Zhang2

  • 1Key Laboratory of Tropical Biological Resources of Ministry of Education, School of Pharmaceutical Sciences, Hainan University, Hainan, China.

Abstract

Insights

Sorafenib resistance in advanced hepatocellular carcinoma (HCC) is common. This study identifies cytoskeleton-associated genes linked to sorafenib resistance in HCC, offering insights for future therapeutic strategies.

Area of Science:

  • Oncology
  • Molecular Biology
  • Genomics

Background:

  • Sorafenib is a standard first-line treatment for advanced hepatocellular carcinoma (HCC).
  • Acquired resistance to sorafenib is a major clinical challenge in HCC treatment.
  • The underlying mechanisms of sorafenib resistance in HCC require further investigation.

Purpose of the Study:

  • To investigate the molecular mechanisms of sorafenib resistance in hepatocellular carcinoma.
  • To identify novel therapeutic targets for overcoming sorafenib resistance.

Main Methods:

  • Utilized KAS-seq technology to analyze single-stranded DNA (ssDNA) profiles in sorafenib-treated SMMC-7721 cells.
  • Integrated differential gene expression data from HCC patients with varying sorafenib responses (GSE109211).
  • Constructed a protein-protein interaction (PPI) network to identify hub genes and analyzed their association with HCC patient prognosis.

Main Results:

  • Identified seven hub differentially expressed genes (ERGs) associated with sorafenib resistance: ACTB, CFL1, ACTG1, ACTN1, WDR1, TAGLN2, and HSPA8.
  • These identified hub genes are significantly associated with cytoskeletal functions.
  • The study highlights a correlation between these cytoskeletal genes and patient outcomes in HCC.

Conclusions:

  • The cytoskeleton plays a crucial role in the development of sorafenib resistance in hepatocellular carcinoma.
  • KAS-seq is a viable method for studying early cellular changes in response to drug treatment, aiding in the understanding of tumor drug resistance.
  • This research provides a foundation for developing new strategies to combat sorafenib resistance in HCC.

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