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Multi-Region Markovian Gaussian Process: An Efficient Method to Discover Directional Communications Across Multiple

Weihan Li, Chengrui Li, Yule Wang

    Arxiv
    |June 10, 2024
    PubMed
    Summary

    We introduce a novel Multi-Region Markovian Gaussian Process (MRM-GP) model. This method combines Gaussian Processes and Linear Dynamical Systems for efficient and interpretable brain communication analysis.

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    Area of Science:

    • Neuroscience
    • Computational Neuroscience
    • Statistical Modeling

    Background:

    • Understanding brain region interactions is vital in neuroscience.
    • Existing statistical methods like Gaussian Processes (GP) and Linear Dynamical Systems (LDS) offer different strengths for analyzing neural communication.
    • GP models excel at discovering latent variables, frequency bands, and communication directions, while LDS models are computationally efficient but less expressive.

    Purpose of the Study:

    • To merge the strengths of GP and LDS methodologies for enhanced analysis of multi-region brain communication.
    • To develop a novel model, the Multi-Region Markovian Gaussian Process (MRM-GP), that bridges the gap between LDS and multi-output GP.
    • To enable efficient and interpretable analysis of neural recordings, revealing communication dynamics across brain regions.

    Main Methods:

    • Developed a Multi-Region Markovian Gaussian Process (MRM-GP) model.
    • The MRM-GP mirrors a multi-output Gaussian Process using a Linear Dynamical System framework.
    • Established a theoretical connection between LDS and multi-output GP, explicitly modeling frequencies and phase delays in the latent space.

    Main Results:

    • The MRM-GP model achieves linear inference cost over time points.
    • The model provides an interpretable low-dimensional representation of neural data.
    • Successfully revealed communication directions between brain regions and separated oscillatory communications into distinct frequency bands.

    Conclusions:

    • The MRM-GP model offers a powerful and efficient approach to analyzing complex brain communication patterns.
    • This integrated methodology enhances the expressiveness of LDS models while maintaining computational efficiency.
    • The model's ability to identify frequency-specific communication pathways provides valuable insights into neural dynamics.