Klebsiella oxytoca inhibits Salmonella infection through multiple microbiota-context-dependent mechanisms

Lisa Osbelt1,2,3, Éva D H Almási1, Marie Wende1,2

  • 1Department of Microbial Immune Regulation, Helmholtz Center for Infection Research, Braunschweig, Germany.

Nature Microbiology
|June 11, 2024
PubMed

Insights

Klebsiella oxytoca provides colonization resistance against Salmonella Typhimurium. Nutrient availability influences this interaction, affecting toxin production and competition.

Area of Science:

  • Microbiology
  • Human Microbiome Research
  • Infectious Disease Dynamics

Background:

  • Klebsiella oxytoca species complex is a human gut microbe, particularly in children.
  • K. oxytoca produces enterotoxins (tilimycin, tilivalline) and aids colonization resistance (CR).
  • The dual role of K. oxytoca in producing toxins and promoting CR is poorly understood.

Purpose of the Study:

  • To elucidate the relationship between K. oxytoca's toxin production and its role in colonization resistance against Salmonella Typhimurium.
  • To investigate the influence of nutrient availability on this host-microbe interaction.

Main Methods:

  • Ex vivo assays and CRISPR-mutagenesis were employed.
  • Various mouse models, including germ-free and gnotobiotic mice, were utilized.
  • In vitro and in vivo experiments assessed antimicrobial activity and colonization resistance.

Main Results:

  • K. oxytoca demonstrated in vitro antimicrobial activity against Salmonella, dependent on tilimycin production and simple carbohydrates.
  • In vivo, CR against Salmonella was toxin-dependent in germ-free mice but largely toxin-independent in mice with residual microbiota.
  • Nutrient availability, specifically toxin-inducing carbohydrates and dulcitol utilization, modulated CR.

Conclusions:

  • Nutrient availability is a critical factor governing both toxin-dependent and substrate-driven competition between K. oxytoca and Salmonella.
  • K. oxytoca's contribution to colonization resistance is context-dependent, influenced by the microbiome and available nutrients.
  • Understanding these dynamics is crucial for microbiome-based therapeutic strategies.